RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 AIFM3Q96NN9 605 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 PIH1D3Q9NQM4 214 aaKnown RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 TBK1Q9UHD2 729 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 ARAP3Q8WWN8 1544 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 XPAP23025 273 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 SLCO1A2P46721 670 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 USP14P54578 494 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 OSBP2Q969R2 916 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 ATP8A1Q9Y2Q0 1164 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 PCDHB6Q9Y5E3 794 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 PTPREP23469 700 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 BASP1P80723 227 aaKnown RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 MECOMQ03112 1051 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 ASPHQ12797 758 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 GAS2L3Q86XJ1 694 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 MAGEF1Q9HAY2 307 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 AATKQ6ZMQ8 1374 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 CCT5P48643 541 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 COG7P83436 770 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 PPP2R5EQ16537 467 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 CDC37Q16543 378 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 OR6B2Q6IFH4 312 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 UBN1Q9NPG3 1134 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 PCP11498 1178 aaKnown RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 FOXD4Q12950 439 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 MAP3K21Q5TCX8 1036 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 GDAP1Q8TB36 358 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 HVCN1Q96D96 273 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 DHTKD1Q96HY7 919 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 IFT122Q9HBG6 1241 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 A0A1W2PQ27 194 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 A0A1W2PQ64 194 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 A0A1W2PQD8 194 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 SFI1A8K8P3 1242 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
COL8A1-201ENST00000261037 CDC25BP30305 580 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 ARHGAP4P98171 946 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 ATP6V1E2Q96A05 226 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 GSDMAQ96QA5 445 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
COL8A1-201ENST00000261037 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 SMIM24O75264 130 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 SRGAP2CP0DJJ0 459 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 PLCG1P19174 1290 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 BPIFB4P59827 614 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 DNAAF3Q8N9W5 541 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 SART1O43290 800 aaKnown RBP13.11□□□□□ -0.31
COL8A1-201ENST00000261037 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 IL6STP40189 918 aaPredicted RBP13.11□□□□□ -0.31
COL8A1-201ENST00000261037 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 CCDC17Q96LX7 622 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 CALN1Q9BXU9 219 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 NHEJ1Q9H9Q4 299 aaPredicted RBP13.11□□□□□ -0.31
COL8A1-201ENST00000261037 SLFNL1Q499Z3 407 aa13.11□□□□□ -0.31
COL8A1-201ENST00000261037 GPC4O75487 556 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 CCNA1P78396 465 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 MAN2A1Q16706 1144 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 ARHGEF18Q6ZSZ5 1173 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 HSPH1Q92598 858 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 HEXIM2Q96MH2 286 aaKnown RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 CUEDC2Q9H467 287 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 INTS9Q9NV88 658 aaKnown RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 STAP2Q9UGK3 403 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 BAG5Q9UL15 447 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 G3BP2Q9UN86 482 aaKnown RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 MCF2LO15068 1137 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 HIP1RO75146 1068 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 DNAJC24Q6P3W2 148 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 RAB44Q7Z6P3 723 aaPredicted RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 MICAL1Q8TDZ2 1067 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 AP1M1Q9BXS5 423 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 DNAJC17Q9NVM6 304 aaKnown RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 ZSWIM5Q9P217 1185 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 ECEL1O95672 775 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 ZSCAN20P17040 1043 aaPredicted RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 EIF4A3P38919 411 aaKnown RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 CDO1Q16878 200 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 VCX3AQ9NNX9 186 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 IQGAP3Q86VI3 1631 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 WDR91A4D1P6 747 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 XPOTO43592 962 aaKnown RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 EIF2AK2P19525 551 aaKnown RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 IL9RQ01113 521 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 SLC7A5Q01650 507 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 TYW5A2RUC4 315 aaKnown RBP13.1□□□□□ -0.31
COL8A1-201ENST00000261037 VGLL3A8MV65 326 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 BNIP3LO60238 219 aa13.1□□□□□ -0.31
COL8A1-201ENST00000261037 AK8Q96MA6 479 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms