RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 PRRT2Q7Z6L0 340 aaPredicted RBP24.99■■□□□ 1.59
SIX3-201ENST00000260653 EIF2AK1Q9BQI3 630 aaKnown RBP24.99■■□□□ 1.59
SIX3-201ENST00000260653 PXMP2Q9NR77 195 aa24.99■■□□□ 1.59
SIX3-201ENST00000260653 IPO5O00410 1097 aaKnown RBP24.98■■□□□ 1.59
SIX3-201ENST00000260653 PEX10O60683 326 aa24.98■■□□□ 1.59
SIX3-201ENST00000260653 PSMC6P62333 389 aa24.98■■□□□ 1.59
SIX3-201ENST00000260653 PPP2R5CQ13362 524 aa24.98■■□□□ 1.59
SIX3-201ENST00000260653 FILIP1Q7Z7B0 1213 aa24.98■■□□□ 1.59
SIX3-201ENST00000260653 LRRC27Q9C0I9 530 aa24.98■■□□□ 1.59
SIX3-201ENST00000260653 KCNH7Q9NS40 1196 aa24.98■■□□□ 1.59
SIX3-201ENST00000260653 RGL1Q9NZL6 768 aa24.98■■□□□ 1.59
SIX3-201ENST00000260653 IDEP14735 1019 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 CNNM4Q6P4Q7 775 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 CLEC11AQ9Y240 323 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 PVALEFA0A1B0GWK0 134 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 TRIM49BA6NDI0 452 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 TPM3P06753 285 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 CDKAL1Q5VV42 579 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 DNAJC19Q96DA6 116 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 PDCD2LQ9BRP1 358 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 PKD2L1Q9P0L9 805 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 UBIAD1Q9Y5Z9 338 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 STK24Q9Y6E0 443 aa24.97■■□□□ 1.59
SIX3-201ENST00000260653 BCRP11274 1271 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 PMS1P54277 932 aaKnown RBP24.96■■□□□ 1.59
SIX3-201ENST00000260653 STIM1Q13586 685 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 TPD52L1Q16890 204 aaPredicted RBP24.96■■□□□ 1.59
SIX3-201ENST00000260653 TKFCQ3LXA3 575 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 KIAA0895Q8NCT3 520 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 INTS13Q9NVM9 706 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 CBFA2T2O43439 604 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 MYCLP12524 364 aaPredicted RBP24.96■■□□□ 1.59
SIX3-201ENST00000260653 ARHGEF16Q5VV41 709 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 MAP1SQ66K74 1059 aaPredicted RBP24.96■■□□□ 1.59
SIX3-201ENST00000260653 PROCA1Q8NCQ7 364 aaPredicted RBP24.96■■□□□ 1.59
SIX3-201ENST00000260653 POLR3CQ9BUI4 534 aaPredicted RBP24.96■■□□□ 1.59
SIX3-201ENST00000260653 UNC45AQ9H3U1 944 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 ACAD9Q9H845 621 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 SLC39A2Q9NP94 309 aa24.96■■□□□ 1.59
SIX3-201ENST00000260653 PSMA7O14818 248 aa24.95■■□□□ 1.59
SIX3-201ENST00000260653 SLC12A3P55017 1021 aa24.95■■□□□ 1.59
SIX3-201ENST00000260653 NIPA1Q7RTP0 329 aa24.95■■□□□ 1.59
SIX3-201ENST00000260653 ARMC9Q7Z3E5 817 aa24.95■■□□□ 1.59
SIX3-201ENST00000260653 TMC6Q7Z403 805 aa24.95■■□□□ 1.59
SIX3-201ENST00000260653 GPBP1Q86WP2 473 aa24.95■■□□□ 1.59
SIX3-201ENST00000260653 OPTNQ96CV9 577 aa24.95■■□□□ 1.59
SIX3-201ENST00000260653 TRAF5O00463 557 aa24.95■■□□□ 1.58
SIX3-201ENST00000260653 PABPC4Q13310 644 aaKnown RBP eCLIP24.95■■□□□ 1.58
SIX3-201ENST00000260653 PTPN21Q16825 1174 aa24.95■■□□□ 1.58
SIX3-201ENST00000260653 HSD17B14Q9BPX1 270 aa24.95■■□□□ 1.58
SIX3-201ENST00000260653 A1CFQ9NQ94 594 aaKnown RBP24.95■■□□□ 1.58
SIX3-201ENST00000260653 KCNH4Q9UQ05 1017 aa24.95■■□□□ 1.58
SIX3-201ENST00000260653 DNM3Q9UQ16 869 aa24.95■■□□□ 1.58
SIX3-201ENST00000260653 A0A0G2JMZ2 1700 aa24.95■■□□□ 1.58
SIX3-201ENST00000260653 CXCL11O14625 94 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 CYP11B2P19099 503 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 LRMPQ12912 555 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 PPIL2Q13356 520 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 CTTNQ14247 550 aaKnown RBP24.94■■□□□ 1.58
SIX3-201ENST00000260653 ARID5BQ14865 1188 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 LBX2Q6XYB7 198 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 TEKT3Q9BXF9 490 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 JADE2Q9NQC1 790 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 NPHP3-ACAD11A0A0J9YXS1 232 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 DDX39AO00148 427 aaKnown RBP24.94■■□□□ 1.58
SIX3-201ENST00000260653 HOXA7P31268 230 aaPredicted RBP24.94■■□□□ 1.58
SIX3-201ENST00000260653 MTMR1Q13613 665 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 B3GNT9Q6UX72 402 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 RIT2Q99578 217 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 CYP39A1Q9NYL5 469 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 BTBD7Q9P203 1132 aa24.94■■□□□ 1.58
SIX3-201ENST00000260653 CACNB1Q02641 598 aaPredicted RBP24.93■■□□□ 1.58
SIX3-201ENST00000260653 EHHADHQ08426 723 aa24.93■■□□□ 1.58
SIX3-201ENST00000260653 APTXQ7Z2E3 356 aaKnown RBP24.93■■□□□ 1.58
SIX3-201ENST00000260653 DYDC2Q96IM9 177 aa24.93■■□□□ 1.58
SIX3-201ENST00000260653 ZNF408Q9H9D4 720 aa24.93■■□□□ 1.58
SIX3-201ENST00000260653 RAD51AP2Q09MP3 1159 aa24.93■■□□□ 1.58
SIX3-201ENST00000260653 CACTINQ8WUQ7 758 aaKnown RBP24.93■■□□□ 1.58
SIX3-201ENST00000260653 AGO4Q9HCK5 861 aaKnown RBP24.93■■□□□ 1.58
SIX3-201ENST00000260653 BMP2KQ9NSY1 1161 aaPredicted RBP24.93■■□□□ 1.58
SIX3-201ENST00000260653 SLITRK3O94933 977 aa24.92■■□□□ 1.58
SIX3-201ENST00000260653 IRX3P78415 501 aaPredicted RBP24.92■■□□□ 1.58
SIX3-201ENST00000260653 ITGB3BPQ13352 177 aaPredicted RBP24.92■■□□□ 1.58
SIX3-201ENST00000260653 ARSHQ5FYA8 562 aa24.92■■□□□ 1.58
SIX3-201ENST00000260653 COASYQ13057 564 aa24.92■■□□□ 1.58
SIX3-201ENST00000260653 TPH2Q8IWU9 490 aa24.92■■□□□ 1.58
SIX3-201ENST00000260653 DHTKD1Q96HY7 919 aaPredicted RBP24.92■■□□□ 1.58
SIX3-201ENST00000260653 GTPBP4Q9BZE4 634 aaKnown RBP24.92■■□□□ 1.58
SIX3-201ENST00000260653 TUFT1Q9NNX1 390 aa24.92■■□□□ 1.58
SIX3-201ENST00000260653 DHX15O43143 795 aaKnown RBP24.91■■□□□ 1.58
SIX3-201ENST00000260653 LDLRAD1Q5T700 205 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 TTI2Q6NXR4 508 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 SYT2Q8N9I0 419 aaPredicted RBP24.91■■□□□ 1.58
SIX3-201ENST00000260653 ASCC2Q9H1I8 757 aaPredicted RBP24.91■■□□□ 1.58
SIX3-201ENST00000260653 PANK4Q9NVE7 773 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 TESPA1A2RU30 521 aaPredicted RBP24.91■■□□□ 1.58
SIX3-201ENST00000260653 MOGSQ13724 837 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 COBLL1Q53SF7 1204 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 VSTM4Q8IW00 320 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 GLIS3Q8NEA6 775 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms