RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FAM26FQ5R3K3 315 aa16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 ANKRD13CQ8N6S4 541 aa16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 RAVER2Q9HCJ3 691 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 GOPCQ9HD26 462 aa16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 MYOZ2Q9NPC6 264 aa16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 COL11A2P13942 1736 aaPredicted RBP16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 ABCB11O95342 1321 aa16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 MYCLP12524 364 aaPredicted RBP16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 COASYQ13057 564 aa16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 NSMFQ6X4W1 530 aa16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 CATSPER3Q86XQ3 398 aa16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 FAM151AQ8WW52 585 aa16.23■□□□□ 0.19
TRAFD1-201ENST00000257604 CLIC2O15247 247 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 INPP5BP32019 993 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 EPS15P42566 896 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 HDLBPQ00341 1268 aaKnown RBP16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 PPARDQ03181 441 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 FKBP15Q5T1M5 1219 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 C7orf25Q9BPX7 421 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 ARFGAP3Q9NP61 516 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 LIMA1Q9UHB6 759 aaKnown RBP16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 CCPG1Q9ULG6 757 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 CDK5RAP2Q96SN8 1893 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 MACROD2A1Z1Q3 448 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 FLOT1O75955 427 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 PRPF6O94906 941 aaKnown RBP16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 PLEKP08567 350 aaPredicted RBP16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 POLD1P28340 1107 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 TNNT3P45378 269 aaPredicted RBP16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 NOVP48745 357 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 FXR2P51116 673 aaKnown RBP eCLIP16.22■□□□□ 0.193e-6■■■■□ 19.5
TRAFD1-201ENST00000257604 KRT26Q7Z3Y9 468 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 KIAA1328Q86T90 577 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 ZKSCAN4Q969J2 545 aaPredicted RBP16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 PSMB7Q99436 277 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 VPS18Q9P253 973 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 BICDL2A1A5D9 508 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 hCG_1984214I3L0E3 225 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 KCNJ6P48051 423 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 NAP1L1P55209 391 aaKnown RBP16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 MICALL2Q8IY33 904 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 ZNF713Q8N859 430 aaPredicted RBP16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 RDH13Q8NBN7 331 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 DEF6Q9H4E7 631 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 ADGRG1Q9Y653 693 aa16.22■□□□□ 0.19
TRAFD1-201ENST00000257604 H3BQF6 201 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 EML1O00423 815 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 MSH4O15457 936 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 KIF5CO60282 957 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 VIL1P09327 827 aaKnown RBP16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 KCNB1Q14721 858 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 UNC13DQ70J99 1090 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 MYOCDQ8IZQ8 938 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 MKL1Q969V6 931 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 DNM3Q9UQ16 869 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 CENPFP49454 3210 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 PLIN4Q96Q06 1357 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 ECM2O94769 699 aaPredicted RBP16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 NT5C2P49902 561 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 MAP3K9P80192 1104 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 DCAF17Q5H9S7 520 aaPredicted RBP16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 PPP4R3AQ6IN85 833 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 FOXR1Q6PIV2 292 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 CACNA2D4Q7Z3S7 1137 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 HOOK2Q96ED9 719 aa16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 DHTKD1Q96HY7 919 aaPredicted RBP16.21■□□□□ 0.19
TRAFD1-201ENST00000257604 GCOM1H8Y6P7 765 aaPredicted RBP16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 PEX10O60683 326 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 POLR2MP0CAP2 368 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 EIF2AK2P19525 551 aaKnown RBP16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 SPP2Q13103 211 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 PTPROQ16827 1216 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 TDRD12Q587J7 1177 aaKnown RBP16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 NBPF12Q5TAG4 269 aaPredicted RBP16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 LRCH2Q5VUJ6 765 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 LDHDQ86WU2 507 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 ZNHIT6Q9NWK9 470 aaKnown RBP16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 MRFAP1Q9Y605 127 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 LGALS16A8MUM7 142 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 OPLAHO14841 1288 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 CASP5P51878 434 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 RRAGAQ7L523 313 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 SLC35F6Q8N357 371 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 BANK1Q8NDB2 785 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 CAPZA3Q96KX2 299 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 TSG101Q99816 390 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 PDE11AQ9HCR9 933 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 HERC5Q9UII4 1024 aaKnown RBP16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 NFIBO00712 420 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 EPHB6O15197 1021 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 GCNT3O95395 438 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 GMPSP49915 693 aaPredicted RBP16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 KCNA1Q09470 495 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 OR8K1Q8NGG5 319 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 CUEDC2Q9H467 287 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 MYH8P13535 1937 aa16.2■□□□□ 0.18
TRAFD1-201ENST00000257604 GAS7O60861 476 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms