RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 PTPRTO14522 1441 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 ERVV-1B6SEH8 477 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 PSMC5P62195 406 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 ZNF568Q3ZCX4 644 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 HABP4Q5JVS0 413 aaKnown RBP18.41■□□□□ 0.54
SORT1-201ENST00000256637 HHATQ5VTY9 493 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 EXOC8Q8IYI6 725 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 RPUSD2Q8IZ73 545 aaKnown RBP18.41■□□□□ 0.54
SORT1-201ENST00000256637 LRRC43Q8N309 656 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 VAV2P52735 878 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 TMEM179Q6ZVK1 233 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 FAM160B2Q86V87 743 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 DNAAF3Q8N9W5 541 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 WDR64B1ANS9 1081 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 AMFRQ9UKV5 643 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 UVSSAQ2YD98 709 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 SH2D3AQ9BRG2 576 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 CPDO75976 1380 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 ADORA2BP29275 332 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 PPP1R2P41236 205 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 MCAMP43121 646 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 ARFGAP3Q9NP61 516 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 IPO11Q9UI26 975 aaKnown RBP18.4■□□□□ 0.54
SORT1-201ENST00000256637 TCOF1Q13428 1488 aaKnown RBP18.4■□□□□ 0.54
SORT1-201ENST00000256637 SNAPC2Q13487 334 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 TTLL11Q8NHH1 800 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 CALN1Q9BXU9 219 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 DPH5Q9H2P9 285 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 ATP11BQ9Y2G3 1177 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 H0YCG3 227 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 STAT3P40763 770 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 RPS6KA1Q15418 735 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 HP1BP3Q5SSJ5 553 aaPredicted RBP18.4■□□□□ 0.54
SORT1-201ENST00000256637 CC2D1AQ6P1N0 951 aaPredicted RBP18.4■□□□□ 0.54
SORT1-201ENST00000256637 ZSWIM5Q9P217 1185 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 IGFBP4P22692 258 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 GRIK1P39086 918 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 INTS8Q75QN2 995 aaKnown RBP18.4■□□□□ 0.54
SORT1-201ENST00000256637 IGFLR1Q9H665 355 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 AFF4Q9UHB7 1163 aaKnown RBP18.4■□□□□ 0.54
SORT1-201ENST00000256637 KCNG1Q9UIX4 513 aa18.4■□□□□ 0.54
SORT1-201ENST00000256637 ATP7BP35670 1465 aa18.39■□□□□ 0.54
SORT1-201ENST00000256637 CCDC94Q9BW85 323 aaPredicted RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 IFIH1Q9BYX4 1025 aaKnown RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 TSKSQ9UJT2 592 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 GNA14O95837 355 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 NR5A1Q13285 461 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 PDZD4Q76G19 769 aaPredicted RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 KDELC2Q7Z4H8 507 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 PNMA8AQ86V59 439 aaPredicted RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 CREB3O43889 395 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 NSFP46459 744 aaKnown RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 PTK2Q05397 1052 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 JPH2Q9BR39 696 aaPredicted RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 MIS12Q9H081 205 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 POLR2BP30876 1174 aaKnown RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 HSPA4P34932 840 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 C17orf53Q8N3J3 647 aaPredicted RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 NAPGQ99747 312 aaPredicted RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 SREBF2Q12772 1141 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 BBS5Q8N3I7 341 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 CBX8Q9HC52 389 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 SARS2Q9NP81 518 aaKnown RBP18.39■□□□□ 0.53
SORT1-201ENST00000256637 PCDHB7Q9Y5E2 793 aa18.39■□□□□ 0.53
SORT1-201ENST00000256637 PIN4Q9Y237 131 aaKnown RBP18.38■□□□□ 0.53
SORT1-201ENST00000256637 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 OVOS2A0A0J9YW53 1432 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 OVOS2Q6IE36 1432 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 CIAO1O76071 339 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 NR2F2P24468 414 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 NOLC1Q14978 699 aaKnown RBP eCLIP18.38■□□□□ 0.531e-7■□□□□ 11.3
SORT1-201ENST00000256637 DEFB128Q7Z7B8 93 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 ANKRD13CQ8N6S4 541 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 GABBR1Q9UBS5 961 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 PNMA6FA0A0J9YX94 578 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 CYP19A1P11511 503 aaPredicted RBP18.38■□□□□ 0.53
SORT1-201ENST00000256637 MFAP3P55082 362 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 TSPY1Q01534 308 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 ZNF148Q9UQR1 794 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 ACTN4O43707 911 aaKnown RBP18.38■□□□□ 0.53
SORT1-201ENST00000256637 TADA2AO75478 443 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 SARNPP82979 210 aaKnown RBP18.38■□□□□ 0.53
SORT1-201ENST00000256637 IQCB1Q15051 598 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 NT5C1BQ96P26 610 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 NUP58Q9BVL2 599 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 DOLKQ9UPQ8 538 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 FYB2Q5VWT5 728 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 TTC14Q96N46 770 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 TMEM39BQ9GZU3 492 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 PAXBP1Q9Y5B6 917 aa18.38■□□□□ 0.53
SORT1-201ENST00000256637 RECQLP46063 649 aaPredicted RBP18.37■□□□□ 0.53
SORT1-201ENST00000256637 OSBP2Q969R2 916 aa18.37■□□□□ 0.53
SORT1-201ENST00000256637 CEP95Q96GE4 821 aa18.37■□□□□ 0.53
SORT1-201ENST00000256637 TNS3Q68CZ2 1445 aa18.37■□□□□ 0.53
SORT1-201ENST00000256637 FOSP01100 380 aaPredicted RBP18.37■□□□□ 0.53
SORT1-201ENST00000256637 CDHR1Q96JP9 859 aa18.37■□□□□ 0.53
SORT1-201ENST00000256637 EXOC3L4Q17RC7 722 aa18.37■□□□□ 0.53
SORT1-201ENST00000256637 ACBD5Q5T8D3 534 aaPredicted RBP18.37■□□□□ 0.53
SORT1-201ENST00000256637 ANGPTL8Q6UXH0 198 aa18.37■□□□□ 0.53
SORT1-201ENST00000256637 MYO3BQ8WXR4 1341 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms