RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 FTCDO95954 541 aa18.85■□□□□ 0.61
SLC52A1-201ENST00000254853 RFC4P35249 363 aa18.85■□□□□ 0.61
SLC52A1-201ENST00000254853 PICALMQ13492 652 aa18.85■□□□□ 0.61
SLC52A1-201ENST00000254853 TTBK2Q6IQ55 1244 aa18.85■□□□□ 0.61
SLC52A1-201ENST00000254853 ADGRF4Q8IZF3 695 aa18.85■□□□□ 0.61
SLC52A1-201ENST00000254853 ARL8AQ96BM9 186 aa18.85■□□□□ 0.61
SLC52A1-201ENST00000254853 NUCKS1Q9H1E3 243 aaKnown RBP18.85■□□□□ 0.61
SLC52A1-201ENST00000254853 NPHP3-ACAD11A0A0J9YXS1 232 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 E9PMD0 336 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 GLI1P08151 1106 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 CLK2P49760 499 aaKnown RBP18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 CACNB1Q02641 598 aaPredicted RBP18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 SEPT2Q15019 361 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 TTMPQ5BVD1 217 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 DNAJC21Q5F1R6 531 aaKnown RBP18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 ALS2CLQ60I27 953 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 CEP63Q96MT8 703 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 CAPS2Q9BXY5 557 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 GGA1Q9UJY5 639 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 ATP6V0A2Q9Y487 856 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 NHSQ6T4R5 1651 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 HSF2BPO75031 334 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 ATP2B4P23634 1241 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 KLRC1P26715 233 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 ARID5AQ03989 594 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 ZNF543Q08ER8 600 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 NAB2Q15742 525 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 GLE1Q53GS7 698 aaKnown RBP18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 RPGRQ92834 1020 aaKnown RBP18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 PCDHA2Q9Y5H9 948 aa18.84■□□□□ 0.61
SLC52A1-201ENST00000254853 IGKV6D-41A0A0C4DH26 115 aa18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 GABPAQ06546 454 aa18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 RAPGEF1Q13905 1077 aa18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 ENOX2Q16206 610 aaKnown RBP18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 PPP1R18Q6NYC8 613 aa18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 TRIM59Q8IWR1 403 aa18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 SLF2Q8IX21 1173 aa18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 BMP2KQ9NSY1 1161 aaPredicted RBP18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 PCDHA12Q9UN75 941 aa18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 KIAA1024Q9UPX6 916 aa18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 DAGLAQ9Y4D2 1042 aa18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.83■□□□□ 0.61
SLC52A1-201ENST00000254853 EPB41P11171 864 aaKnown RBP18.83■□□□□ 0.6
SLC52A1-201ENST00000254853 SLC16A2P36021 539 aa18.83■□□□□ 0.6
SLC52A1-201ENST00000254853 CARSP49589 748 aaKnown RBP18.83■□□□□ 0.6
SLC52A1-201ENST00000254853 CUL5Q93034 780 aa18.83■□□□□ 0.6
SLC52A1-201ENST00000254853 RUFY1Q96T51 708 aa18.83■□□□□ 0.6
SLC52A1-201ENST00000254853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.83■□□□□ 0.6
SLC52A1-201ENST00000254853 RABEP2Q9H5N1 569 aa18.83■□□□□ 0.6
SLC52A1-201ENST00000254853 GDF3Q9NR23 364 aa18.83■□□□□ 0.6
SLC52A1-201ENST00000254853 RNF14Q9UBS8 474 aa18.83■□□□□ 0.6
SLC52A1-201ENST00000254853 GRIN2DO15399 1336 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 A0A087X0T9 212 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 ESYT3A0FGR9 886 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 ZSCAN5CA6NGD5 496 aaPredicted RBP18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 FAM228BP0C875 321 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 CCT5P48643 541 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 GNGT1P63211 74 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 SLC18A3Q16572 532 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 HYIQ5T013 277 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 TTC19Q6DKK2 380 aaPredicted RBP18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 IFT20Q8IY31 132 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 ZIM3Q96PE6 472 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 PACSIN1Q9BY11 444 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 NFU1Q9UMS0 254 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 PACSIN2Q9UNF0 486 aaPredicted RBP18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 HEXIM1O94992 359 aaKnown RBP18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 GNA14O95837 355 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 FAM153BP0C7A2 387 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 PLA2G4BP0C869 781 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 NNTQ13423 1086 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 FAM153CQ494X1 144 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 HERC4Q5GLZ8 1057 aaPredicted RBP18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 TRAPPC3LQ5T215 181 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 PRR5LQ6MZQ0 368 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 GBP6Q6ZN66 633 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 CCDC65Q8IXS2 484 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 FAM133AQ8N9E0 248 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 SCFD1Q8WVM8 642 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 EPB41L5Q9HCM4 733 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 LUC7LQ9NQ29 371 aaKnown RBP18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 FAM153AQ9UHL3 310 aa18.82■□□□□ 0.6
SLC52A1-201ENST00000254853 POTEB3A0JP26 581 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 POTECB2RU33 542 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 USP17L10C9JJH3 530 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 EIF3HO15372 352 aaKnown RBP eCLIP18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 TTLL1O95922 423 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 MRPL12P52815 198 aaKnown RBP18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 MARSP56192 900 aaKnown RBP18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 GUCY2DQ02846 1103 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 MEI1Q5TIA1 1274 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 POTEBQ6S5H4 581 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 GPBP1Q86WP2 473 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 IFT81Q8WYA0 676 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 NT5C3AQ9H0P0 336 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 KCTD10Q9H3F6 313 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 PCDHGC5Q9Y5F6 944 aa18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 RNASE9P60153 205 aaKnown RBP18.81■□□□□ 0.6
SLC52A1-201ENST00000254853 KLHL30Q0D2K2 578 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms