RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CCDC40Q4G0X9 1142 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 FKBP1CQ5VVH2 108 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 GALNT17Q6IS24 598 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 FGFBP2Q9BYJ0 223 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 PDHXO00330 501 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 NMT1P30419 496 aaKnown RBP12.97□□□□□ -0.33
LIN28A-201ENST00000254231 TBC1D8BQ0IIM8 1120 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 NAALADL2Q58DX5 795 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 ERO1BQ86YB8 467 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 C4orf32Q8N8J7 132 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 LPAR1Q92633 364 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 SLC38A10Q9HBR0 1119 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 HPSEQ9Y251 543 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 ATRNL1Q5VV63 1379 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 MTMR14Q8NCE2 650 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 ZBED3Q96IU2 234 aaPredicted RBP12.96□□□□□ -0.33
LIN28A-201ENST00000254231 LXNQ9BS40 222 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 TCHPQ9BT92 498 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 VPS33BQ9H267 617 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
LIN28A-201ENST00000254231 RABGAP1Q9Y3P9 1069 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 R3HCC1Q9Y3T6 440 aaKnown RBP12.96□□□□□ -0.33
LIN28A-201ENST00000254231 A0A1B0GUL6 1792 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 GOLGA8IPA6NC78 632 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 GOLGA8JA6NMD2 632 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 SMTNL1A8MU46 457 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 KANK3Q6NY19 840 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 MMTAG2Q9BU76 263 aaKnown RBP12.96□□□□□ -0.33
LIN28A-201ENST00000254231 GABBR1Q9UBS5 961 aa12.96□□□□□ -0.33
LIN28A-201ENST00000254231 ZNF536O15090 1300 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 GOLGA6L6A8MZA4 724 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 USP8P40818 1118 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 ZNF75DP51815 510 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 AMPD3Q01432 767 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 UBXN1Q04323 297 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 SEZ6Q53EL9 994 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 PNMA8AQ86V59 439 aaPredicted RBP12.96□□□□□ -0.34
LIN28A-201ENST00000254231 UNC45AQ9H3U1 944 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 ACAD9Q9H845 621 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 PDGFCQ9NRA1 345 aa12.96□□□□□ -0.34
LIN28A-201ENST00000254231 FAM207AQ9NSI2 230 aaPredicted RBP12.96□□□□□ -0.34
LIN28A-201ENST00000254231 PSMA7O14818 248 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 NKRFO15226 690 aaKnown RBP eCLIP12.95□□□□□ -0.34
LIN28A-201ENST00000254231 EDIL3O43854 480 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 PAK1Q13153 545 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 FUCA2Q9BTY2 467 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 AFG3L2Q9Y4W6 797 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 TISP43B9A030 160 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 TRPA1O75762 1119 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 FOSP01100 380 aaPredicted RBP12.95□□□□□ -0.34
LIN28A-201ENST00000254231 DSG3P32926 999 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 APBA1Q02410 837 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 FAM47CQ5HY64 1035 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 ODR4Q5SWX8 454 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 MCF2L2Q86YR7 1114 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 BICD1Q96G01 975 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 PNMA5Q96PV4 448 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 TEKT3Q9BXF9 490 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 MOV10L1Q9BXT6 1211 aaKnown RBP12.95□□□□□ -0.34
LIN28A-201ENST00000254231 SEPT11Q9NVA2 429 aaKnown RBP12.95□□□□□ -0.34
LIN28A-201ENST00000254231 PYCARDQ9ULZ3 195 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 CASZ1Q86V15 1759 aa12.95□□□□□ -0.34
LIN28A-201ENST00000254231 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
LIN28A-201ENST00000254231 IQCB1Q15051 598 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
LIN28A-201ENST00000254231 SFR1Q86XK3 245 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
LIN28A-201ENST00000254231 TRAPPC12Q8WVT3 735 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 DESI2Q9BSY9 194 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 TRIM9Q9C026 710 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 SPATC1LQ9H0A9 340 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 NLRC4Q9NPP4 1024 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 MYH6P13533 1939 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 CDK5RAP2Q96SN8 1893 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 TBC1D12O60347 775 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 CATSPERGQ6ZRH7 1159 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 ANKRD20A12PQ8NF67 263 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 CEP170P1Q96L14 293 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
LIN28A-201ENST00000254231 GJA5P36382 358 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 USP50Q70EL3 339 aaPredicted RBP12.94□□□□□ -0.34
LIN28A-201ENST00000254231 CCDC127Q96BQ5 260 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 RUSC1Q9BVN2 902 aa12.94□□□□□ -0.34
LIN28A-201ENST00000254231 VCANP13611 3396 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 M0R2N6 131 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 ARL6IP4Q66PJ3 421 aaKnown RBP12.93□□□□□ -0.34
LIN28A-201ENST00000254231 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 NSUN6Q8TEA1 469 aaKnown RBP12.93□□□□□ -0.34
LIN28A-201ENST00000254231 TSC1Q92574 1164 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 RANBP17Q9H2T7 1088 aaKnown RBP12.93□□□□□ -0.34
LIN28A-201ENST00000254231 XIRP2A4UGR9 3374 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 DDX60LQ5H9U9 1706 aaKnown RBP12.93□□□□□ -0.34
LIN28A-201ENST00000254231 SDK1Q7Z5N4 2213 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 B4DLN1 442 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 AOC2O75106 756 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 GJB1P08034 283 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 SRGAP2CP0DJJ0 459 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 SKILP12757 684 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms