RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 COG2Q14746 738 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 CCL15Q16663 113 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 UBE2SQ16763 222 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 USH1GQ495M9 461 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 KRT79Q5XKE5 535 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 CNNM4Q6P4Q7 775 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 REXO1L1PQ8IX06 675 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 BRI3BPQ8WY22 251 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 TRIM47Q96LD4 638 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 RANBP17Q9H2T7 1088 aaKnown RBP12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 TAB2Q9NYJ8 693 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 DDX25Q9UHL0 483 aaKnown RBP12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 FAM155AB1AL88 458 aaPredicted RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 VWA5AO00534 786 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 SLU7O95391 586 aaKnown RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 SLC10A3P09131 477 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 CETPP11597 493 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 EEF1GP26641 437 aaKnown RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 CPXCR1Q8N123 301 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 P2RX7Q99572 595 aaKnown RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 PTPN18Q99952 460 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 MMTAG2Q9BU76 263 aaKnown RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 DNAI1Q9UI46 699 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 BTBD19C9JJ37 291 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 MFAP3LO75121 409 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 HOXA7P31268 230 aaPredicted RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 MCTP2Q6DN12 878 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 FAM114A1Q8IWE2 563 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 LRRC15Q8TF66 581 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 ERO1AQ96HE7 468 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 AGBL1Q96MI9 1066 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 ASCC2Q9H1I8 757 aaPredicted RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 RAVER2Q9HCJ3 691 aaKnown RBP12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
CLUHP3-201ENST00000254109 ZNF536O15090 1300 aa12.71□□□□□ -0.37
CLUHP3-201ENST00000254109 TRIM49BA6NDI0 452 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 CCDC175P0C221 793 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 CASP14P31944 242 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 IRX3P78415 501 aaPredicted RBP12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 UBXN1Q04323 297 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 NCBP1Q09161 790 aaKnown RBP12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 GRB10Q13322 594 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 SNX29Q8TEQ0 813 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 P2RX5Q93086 422 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 ZIC5Q96T25 663 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 AMNQ9BXJ7 453 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 SRRTQ9BXP5 876 aaKnown RBP12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 SLC38A10Q9HBR0 1119 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 ADAMTS5Q9UNA0 930 aa12.71□□□□□ -0.38
CLUHP3-201ENST00000254109 PVALEFA0A1B0GWK0 134 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 PDHXO00330 501 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 CYP2C8P10632 490 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 CCNE1P24864 410 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 APLP1P51693 650 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 USP11P51784 963 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 HTRA3P83110 453 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 COBLL1Q53SF7 1204 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 TTI2Q6NXR4 508 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 TOGARAM2Q6ZUX3 1019 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 PDCL2Q8N4E4 241 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 CSGALNACT2Q8N6G5 542 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 LARP4BQ92615 738 aaKnown RBP12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 PNMA5Q96PV4 448 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 L2HGDHQ9H9P8 463 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 HOXC10Q9NYD6 342 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 PCDHA12Q9UN75 941 aa12.7□□□□□ -0.38
CLUHP3-201ENST00000254109 PES1O00541 588 aaKnown RBP12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 EDIL3O43854 480 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 ZBED4O75132 1171 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 GYPCP04921 128 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 PMS1P54277 932 aaKnown RBP12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 AP3B2Q13367 1082 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 TMEM132BQ14DG7 1078 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 UNC13DQ70J99 1090 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 TMTC1Q8IUR5 882 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 REPS2Q8NFH8 660 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 RAD54LQ92698 747 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 CREBZFQ9NS37 354 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 ZNF215Q9UL58 517 aaPredicted RBP12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 CTDP1Q9Y5B0 961 aaPredicted RBP12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 A0A1W2PQC6 194 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 POTEMA6NI47 508 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 SOWAHDA6NJG2 315 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 LGALS16A8MUM7 142 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 ICAM1P05362 532 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 OSBPP22059 807 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 CASQ1P31415 396 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 HERVK_113P62684 666 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 STK4Q13043 487 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms