RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 LDHDQ86WU2 507 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 NSUN6Q8TEA1 469 aaKnown RBP18.66■□□□□ 0.58
ACTN4-201ENST00000252699 AKT3Q9Y243 479 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 NT5C1BQ96P26 610 aa18.65■□□□□ 0.58
ACTN4-201ENST00000252699 ACTN4O43707 911 aaKnown RBP18.65■□□□□ 0.58
ACTN4-201ENST00000252699 PDHBP11177 359 aa18.65■□□□□ 0.58
ACTN4-201ENST00000252699 YARSP54577 528 aaKnown RBP18.65■□□□□ 0.58
ACTN4-201ENST00000252699 RNF187Q5TA31 235 aaPredicted RBP18.65■□□□□ 0.58
ACTN4-201ENST00000252699 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
ACTN4-201ENST00000252699 PDE6CP51160 858 aa18.65■□□□□ 0.58
ACTN4-201ENST00000252699 PRELPP51888 382 aa18.65■□□□□ 0.58
ACTN4-201ENST00000252699 KIAA1524Q8TCG1 905 aa18.65■□□□□ 0.58
ACTN4-201ENST00000252699 NDST4Q9H3R1 872 aa18.65■□□□□ 0.58
ACTN4-201ENST00000252699 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.65■□□□□ 0.58
ACTN4-201ENST00000252699 PRR29P0C7W0 189 aa18.65■□□□□ 0.58
ACTN4-201ENST00000252699 USP11P51784 963 aa18.65■□□□□ 0.58
ACTN4-201ENST00000252699 FBXO2Q9UK22 296 aaPredicted RBP18.65■□□□□ 0.58
ACTN4-201ENST00000252699 HMGCS2P54868 508 aa18.64■□□□□ 0.58
ACTN4-201ENST00000252699 STXBP2Q15833 593 aa18.64■□□□□ 0.58
ACTN4-201ENST00000252699 PTPROQ16827 1216 aa18.64■□□□□ 0.58
ACTN4-201ENST00000252699 TCP11X2Q5H9J9 407 aa18.64■□□□□ 0.58
ACTN4-201ENST00000252699 MMS19Q96T76 1030 aa18.64■□□□□ 0.58
ACTN4-201ENST00000252699 KIF1AQ12756 1690 aa18.64■□□□□ 0.58
ACTN4-201ENST00000252699 TROAPQ12815 778 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 UBLCP1Q8WVY7 318 aaPredicted RBP18.64■□□□□ 0.57
ACTN4-201ENST00000252699 IQCGQ9H095 443 aaKnown RBP18.64■□□□□ 0.57
ACTN4-201ENST00000252699 TBC1D22BQ9NU19 505 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 IFT20Q8IY31 132 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 RAD54LQ92698 747 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 RNF34Q969K3 372 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 AP5M1Q9H0R1 490 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 FOXN1O15353 648 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 JAK3P52333 1124 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 MICALCLQ6ZW33 695 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 STMN4Q9H169 189 aaPredicted RBP18.64■□□□□ 0.57
ACTN4-201ENST00000252699 UTP11Q9Y3A2 253 aaKnown RBP18.64■□□□□ 0.57
ACTN4-201ENST00000252699 BZW2Q9Y6E2 419 aaKnown RBP18.64■□□□□ 0.57
ACTN4-201ENST00000252699 CAMTA1Q9Y6Y1 1673 aa18.64■□□□□ 0.57
ACTN4-201ENST00000252699 WDR64B1ANS9 1081 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 IPO4Q8TEX9 1081 aaKnown RBP18.63■□□□□ 0.57
ACTN4-201ENST00000252699 POLD4Q9HCU8 107 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 PVALEFA0A1B0GWK0 134 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 FDX1P10109 184 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 PEX3P56589 373 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 RPAP3Q9H6T3 665 aaPredicted RBP18.63■□□□□ 0.57
ACTN4-201ENST00000252699 POTEFA5A3E0 1075 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 POTEIP0CG38 1075 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 PIK3CAP42336 1068 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 HDLBPQ00341 1268 aaKnown RBP18.63■□□□□ 0.57
ACTN4-201ENST00000252699 DNAJC21Q5F1R6 531 aaKnown RBP18.63■□□□□ 0.57
ACTN4-201ENST00000252699 POTEGQ6S5H5 508 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 POTEEQ6S8J3 1075 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 BANK1Q8NDB2 785 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 PAIP2Q9BPZ3 127 aaKnown RBP18.63■□□□□ 0.57
ACTN4-201ENST00000252699 SCAF8Q9UPN6 1271 aaKnown RBP18.63■□□□□ 0.57
ACTN4-201ENST00000252699 IPO5O00410 1097 aaKnown RBP18.63■□□□□ 0.57
ACTN4-201ENST00000252699 KCNK3O14649 394 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 PRCPP42785 496 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 ZBED6P86452 979 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 C2orf69Q8N8R5 385 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 COMMD10Q9Y6G5 202 aa18.63■□□□□ 0.57
ACTN4-201ENST00000252699 TRIM49BA6NDI0 452 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 FERP16591 822 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 STAT3P40763 770 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 SARM1Q6SZW1 724 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 SFR1Q86XK3 245 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 PPP1R14CQ8TAE6 165 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 DYDC2Q96IM9 177 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 PPP1R13BQ96KQ4 1090 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 ASIC3Q9UHC3 531 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 HYOU1Q9Y4L1 999 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 RGL2O15211 777 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 MFAP3P55082 362 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 RASSF7Q02833 373 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 MTMR2Q13614 643 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 TSNARE1Q96NA8 513 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 VPS18Q9P253 973 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 MARK3P27448 753 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 WHAMMP3Q1A5X7 153 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 TMEM39BQ9GZU3 492 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 CNTNAP5Q8WYK1 1306 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 LRRN2O75325 713 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 GMPSP49915 693 aaPredicted RBP18.62■□□□□ 0.57
ACTN4-201ENST00000252699 PTK2Q05397 1052 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 ATRIPQ8WXE1 791 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 GCNT4Q9P109 453 aa18.62■□□□□ 0.57
ACTN4-201ENST00000252699 ZNF215Q9UL58 517 aaPredicted RBP18.62■□□□□ 0.57
ACTN4-201ENST00000252699 KRT76Q01546 638 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 EXOC8Q8IYI6 725 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 RPGRIP1Q96KN7 1286 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 ADGRA1Q86SQ6 560 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 CCDC105Q8IYK2 499 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 K7ERI5 159 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 MXI1P50539 228 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 LACTBP83111 547 aaPredicted RBP18.61■□□□□ 0.57
ACTN4-201ENST00000252699 NFIAQ12857 509 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 PADI6Q6TGC4 694 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 ARFGAP2Q8N6H7 521 aa18.61■□□□□ 0.57
ACTN4-201ENST00000252699 TCP1P17987 556 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms