RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 MXRA8Q9BRK3 442 aa14.58□□□□□ -0.08
VPREB3-201ENST00000248948 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.08
VPREB3-201ENST00000248948 HIPK3Q9H422 1215 aa14.58□□□□□ -0.08
VPREB3-201ENST00000248948 TMEM260Q9NX78 707 aa14.58□□□□□ -0.08
VPREB3-201ENST00000248948 MYH9P35579 1960 aaKnown RBP14.57□□□□□ -0.08
VPREB3-201ENST00000248948 LGALS2P05162 132 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 CYP3A4P08684 503 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 PSEN2P49810 448 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 FXR1P51114 621 aaKnown RBP eCLIP14.57□□□□□ -0.08
VPREB3-201ENST00000248948 MFSD10Q14728 455 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 LRIT3Q3SXY7 679 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 JAKMIP3Q5VZ66 844 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 CYFIP1Q7L576 1253 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 IL27Q8NEV9 243 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 GPR20Q99678 358 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 C16orf70Q9BSU1 422 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 NOC4LQ9BVI4 516 aaKnown RBP14.57□□□□□ -0.08
VPREB3-201ENST00000248948 C22orf23Q9BZE7 217 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 TRPV6Q9H1D0 765 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 TRMT13Q9NUP7 481 aaKnown RBP14.57□□□□□ -0.08
VPREB3-201ENST00000248948 GTF2IRD1Q9UHL9 959 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 NFASCO94856 1347 aa14.57□□□□□ -0.08
VPREB3-201ENST00000248948 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 PPFIA3O75145 1194 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 XBP1P17861 261 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 NLRP5P59047 1200 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 PPIGQ13427 754 aaKnown RBP eCLIP14.56□□□□□ -0.08
VPREB3-201ENST00000248948 ME3Q16798 604 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 KIAA0753Q2KHM9 967 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 TMEM199Q8N511 208 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 C7orf31Q8N865 590 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 WASF1Q92558 559 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 UPF2Q9HAU5 1272 aaKnown RBP14.56□□□□□ -0.08
VPREB3-201ENST00000248948 JPH1Q9HDC5 661 aaPredicted RBP14.56□□□□□ -0.08
VPREB3-201ENST00000248948 KCNH7Q9NS40 1196 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 PCDH10Q9P2E7 1040 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 ZNF215Q9UL58 517 aaPredicted RBP14.56□□□□□ -0.08
VPREB3-201ENST00000248948 PCDHA4Q9UN74 947 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 EMSYQ7Z589 1322 aa14.56□□□□□ -0.08
VPREB3-201ENST00000248948 SIP14410 1827 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 GBF1Q92538 1859 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 H3BRB1 525 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 MEIS1O00470 390 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 SORBS3O60504 671 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 LARGE1O95461 756 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 RBL2Q08999 1139 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 PSRC1Q6PGN9 363 aaPredicted RBP14.55□□□□□ -0.08
VPREB3-201ENST00000248948 CCDC155Q8N6L0 562 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 SDF4Q9BRK5 362 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 PPP1R12CQ9BZL4 782 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 TUT1Q9H6E5 874 aaKnown RBP14.55□□□□□ -0.08
VPREB3-201ENST00000248948 AGO4Q9HCK5 861 aaKnown RBP14.55□□□□□ -0.08
VPREB3-201ENST00000248948 NOD1Q9Y239 953 aa14.55□□□□□ -0.08
VPREB3-201ENST00000248948 IGLV3-22A0A075B6J6 115 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 FAM86B1E9PN63 330 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 M0R2N6 131 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 ATP9AO75110 1047 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 CTDNEP1O95476 244 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 FAM86B2P0C5J1 330 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 HOXC8P31273 242 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 CIITAP33076 1130 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 TCF7P36402 384 aaPredicted RBP14.54□□□□□ -0.08
VPREB3-201ENST00000248948 ZNF76P36508 570 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 NPY5RQ15761 445 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 PTGISQ16647 500 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 BLIDQ8IZY5 108 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 CAGE1Q8TC20 777 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 RASGRP4Q8TDF6 673 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 KIF2CQ99661 725 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 WNT8AQ9H1J5 351 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 BCAS3Q9H6U6 928 aa14.54□□□□□ -0.08
VPREB3-201ENST00000248948 UMODL1Q5DID0 1318 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 ADAMTS3O15072 1205 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 PFKMP08237 780 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 CYP2C9P11712 490 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 CSF2RAP15509 400 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 CYP2C18P33260 490 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 RFC2P35250 354 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 CHMP4BP1P59074 171 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 SP4Q02446 784 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 BFSP2Q13515 415 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 RABEP1Q15276 862 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 GDF6Q6KF10 455 aaPredicted RBP14.53□□□□□ -0.08
VPREB3-201ENST00000248948 PLA2G4DQ86XP0 818 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 NSUN7Q8NE18 718 aaKnown RBP14.53□□□□□ -0.08
VPREB3-201ENST00000248948 CYP2W1Q8TAV3 490 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 SEPT1Q8WYJ6 367 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 AIFM3Q96NN9 605 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 CTAGE1Q96RT6 745 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 ALG1Q9BT22 464 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 PHF20Q9BVI0 1012 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 PKD2L1Q9P0L9 805 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 ORC3Q9UBD5 711 aaPredicted RBP14.53□□□□□ -0.08
VPREB3-201ENST00000248948 HDAC6Q9UBN7 1215 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 SLC9A2Q9UBY0 812 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 LIMCH1Q9UPQ0 1083 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 SZT2Q5T011 3432 aa14.53□□□□□ -0.08
VPREB3-201ENST00000248948 ARP10275 920 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 USP11P51784 963 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 EPHB4P54760 987 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms