RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CYP11B2P19099 503 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 USP11P51784 963 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 RGL1Q9NZL6 768 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 SPDYE2BA6NHP3 402 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 SPDYE6P0CI01 402 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 CAPZA3Q96KX2 299 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 DRC1Q96MC2 740 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 FBXO28Q9NVF7 368 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 IPO7O95373 1038 aaKnown RBP17.46■□□□□ 0.39
LRFN1-201ENST00000248668 PPP1R2P41236 205 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 CASP5P51878 434 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 JAKMIP2Q96AA8 810 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 ENTPD3O75355 529 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 FKBP1AP62942 108 aaKnown RBP17.46■□□□□ 0.39
LRFN1-201ENST00000248668 EHHADHQ08426 723 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 MAN2A1Q16706 1144 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 ARSHQ5FYA8 562 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 RSRC2Q7L4I2 434 aaKnown RBP17.46■□□□□ 0.39
LRFN1-201ENST00000248668 CCDC65Q8IXS2 484 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 OGFOD1Q8N543 542 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 ETNPPLQ8TBG4 499 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 ZNF70Q9UC06 446 aaPredicted RBP17.46■□□□□ 0.39
LRFN1-201ENST00000248668 KDM3AQ9Y4C1 1321 aa17.46■□□□□ 0.39
LRFN1-201ENST00000248668 SFI1A8K8P3 1242 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 RSPH10B2B2RC85 870 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 MSH4O15457 936 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 RSPH10BP0C881 870 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 STAT2P52630 851 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 SRGAP1Q7Z6B7 1085 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 GMCL1P1Q8NEA9 526 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 LENG9Q96B70 501 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 GMCL1Q96IK5 515 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 ERGIC2Q96RQ1 377 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 GREB1LQ9C091 1923 aaPredicted RBP17.45■□□□□ 0.38
LRFN1-201ENST00000248668 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 CYLC1P35663 651 aaPredicted RBP17.45■□□□□ 0.38
LRFN1-201ENST00000248668 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
LRFN1-201ENST00000248668 PIGOQ8TEQ8 1089 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 NUP58Q9BVL2 599 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 LRRC27Q9C0I9 530 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 DEF6Q9H4E7 631 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 SIK3Q9Y2K2 1263 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 LRRC53A6NM62 1247 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 PNMA6AP0CW24 399 aaPredicted RBP17.45■□□□□ 0.38
LRFN1-201ENST00000248668 ARID5AQ03989 594 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 LRRC63Q05C16 580 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 SEMA3FQ13275 785 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 AP3B2Q13367 1082 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 GLT8D2Q9H1C3 349 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 FHOD1Q9Y613 1164 aa17.45■□□□□ 0.38
LRFN1-201ENST00000248668 ZNF263O14978 683 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 ATP1A1P05023 1023 aaKnown RBP17.44■□□□□ 0.38
LRFN1-201ENST00000248668 SPIRE1Q08AE8 756 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 CACNA2D4Q7Z3S7 1137 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 SLFN12Q8IYM2 578 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 ANKRD13CQ8N6S4 541 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 TTLL6Q8N841 843 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 SCFD1Q8WVM8 642 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 PKD2L1Q9P0L9 805 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 EML1O00423 815 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 ZBTB39O15060 712 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 CTTNQ14247 550 aaKnown RBP17.44■□□□□ 0.38
LRFN1-201ENST00000248668 MEA1Q16626 185 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 BHMT2Q9H2M3 363 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 EMILIN3Q9NT22 766 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 ARFGEF1Q9Y6D6 1849 aa17.44■□□□□ 0.38
LRFN1-201ENST00000248668 SPATA31C1P0DKV0 1188 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 GPR161Q8N6U8 529 aaKnown RBP17.43■□□□□ 0.38
LRFN1-201ENST00000248668 IKZF4Q9H2S9 585 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 ARHGEF10LQ9HCE6 1279 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 ARHGAP20Q9P2F6 1191 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 DPEP1P16444 411 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 EIF4A3P38919 411 aaKnown RBP17.43■□□□□ 0.38
LRFN1-201ENST00000248668 SLC12A3P55017 1021 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 FKBP3Q00688 224 aaKnown RBP17.43■□□□□ 0.38
LRFN1-201ENST00000248668 HAUS3Q68CZ6 603 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 TRMT1LQ7Z2T5 733 aaKnown RBP17.43■□□□□ 0.38
LRFN1-201ENST00000248668 SFR1Q86XK3 245 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 REEP2Q9BRK0 252 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 ZBTB21Q9ULJ3 1066 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 MYO6Q9UM54 1294 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 DNM3Q9UQ16 869 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 PRPF6O94906 941 aaKnown RBP17.43■□□□□ 0.38
LRFN1-201ENST00000248668 FGFR1OPO95684 399 aaKnown RBP17.43■□□□□ 0.38
LRFN1-201ENST00000248668 KRT83P78385 493 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 PSMD2Q13200 908 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 DGKZQ13574 1117 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 COBLL1Q53SF7 1204 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 NOA1Q8NC60 698 aaKnown RBP17.43■□□□□ 0.38
LRFN1-201ENST00000248668 HAUS4Q9H6D7 363 aa17.43■□□□□ 0.38
LRFN1-201ENST00000248668 CYP3A7-CYP3A51PA0A087WV96 503 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 CYP3A7P24462 503 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 SREBF1P36956 1147 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 BMS1Q14692 1282 aaKnown RBP17.42■□□□□ 0.38
LRFN1-201ENST00000248668 TDRD12Q587J7 1177 aaKnown RBP17.42■□□□□ 0.38
LRFN1-201ENST00000248668 RETREG2Q8NC44 543 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms