RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 PURBQ96QR8 312 aaKnown RBP20■□□□□ 0.79
PTPN12-201ENST00000248594 PRPHP41219 470 aa20■□□□□ 0.79
PTPN12-201ENST00000248594 RGS16O15492 202 aaPredicted RBP19.99■□□□□ 0.79
PTPN12-201ENST00000248594 TBC1D25Q3MII6 688 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 SYCP3Q8IZU3 236 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 TBC1D2BQ9UPU7 963 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 PYGBP11216 843 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 NUGGCQ68CJ6 796 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 CD302Q8IX05 232 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 CNBD1Q8NA66 436 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 CCHCR1Q8TD31 782 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 MST1RQ04912 1400 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 ANKRD33BA6NCL7 494 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 FOXO6A8MYZ6 492 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 CCND1P24385 295 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 MSH2P43246 934 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 NCALDP61601 193 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 PDCD2Q16342 344 aaPredicted RBP19.99■□□□□ 0.79
PTPN12-201ENST00000248594 AMOTQ4VCS5 1084 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 SLC52A2Q9HAB3 445 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 DBR1Q9UK59 544 aaKnown RBP19.99■□□□□ 0.79
PTPN12-201ENST00000248594 USH1CQ9Y6N9 552 aa19.99■□□□□ 0.79
PTPN12-201ENST00000248594 RTN3O95197 1032 aaPredicted RBP19.98■□□□□ 0.79
PTPN12-201ENST00000248594 PLTPP55058 493 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 PDXDC2PQ6P474 469 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 FBXL16Q8N461 479 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 FAM129AQ9BZQ8 928 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 ETNK1Q9HBU6 452 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 PIH1D3Q9NQM4 214 aaKnown RBP19.98■□□□□ 0.79
PTPN12-201ENST00000248594 STK4Q13043 487 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 SPDYE3A6NKU9 549 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 LUC7L3O95232 432 aaKnown RBP19.98■□□□□ 0.79
PTPN12-201ENST00000248594 FERP16591 822 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 MCAMP43121 646 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 DYMQ7RTS9 669 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 STAG2Q8N3U4 1231 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 MAGEB6Q8N7X4 407 aa19.98■□□□□ 0.79
PTPN12-201ENST00000248594 ANKARQ7Z5J8 1434 aa19.97■□□□□ 0.79
PTPN12-201ENST00000248594 SNRPA1P09661 255 aaKnown RBP19.97■□□□□ 0.79
PTPN12-201ENST00000248594 NKX1-2Q9UD57 310 aaPredicted RBP19.97■□□□□ 0.79
PTPN12-201ENST00000248594 AHCYL1O43865 530 aa19.97■□□□□ 0.79
PTPN12-201ENST00000248594 GHRP10912 638 aa19.97■□□□□ 0.79
PTPN12-201ENST00000248594 POLR2FP61218 127 aaKnown RBP19.97■□□□□ 0.79
PTPN12-201ENST00000248594 ARMC9Q7Z3E5 817 aa19.97■□□□□ 0.79
PTPN12-201ENST00000248594 SHISA4Q96DD7 197 aa19.97■□□□□ 0.79
PTPN12-201ENST00000248594 LMCD1Q9NZU5 365 aa19.97■□□□□ 0.79
PTPN12-201ENST00000248594 ADAM22Q9P0K1 906 aa19.97■□□□□ 0.79
PTPN12-201ENST00000248594 NBPF26B4DH59 902 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 TCP11X1B4DZS4 312 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 FOXO4P98177 505 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 LRRC41Q15345 812 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 MUM1Q2TAK8 710 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 HHATQ5VTY9 493 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 CRELD2Q6UXH1 353 aaPredicted RBP19.96■□□□□ 0.79
PTPN12-201ENST00000248594 GIGYF2Q6Y7W6 1299 aaKnown RBP19.96■□□□□ 0.79
PTPN12-201ENST00000248594 KRT28Q7Z3Y7 464 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 NBPF15Q8N660 670 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 USP38Q8NB14 1042 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 UIMC1Q96RL1 719 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 SYT15Q9BQS2 421 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 ISCUQ9H1K1 167 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 CNNM1Q9NRU3 951 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 VEGFAP15692 232 aaPredicted RBP19.96■□□□□ 0.79
PTPN12-201ENST00000248594 ZNF449Q6P9G9 518 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 IFNL3Q8IZI9 196 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 P2RX5Q93086 422 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 DUSP9Q99956 384 aaKnown RBP19.96■□□□□ 0.79
PTPN12-201ENST00000248594 THAP9Q9H5L6 903 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 PLAGL2Q9UPG8 496 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 STRCQ7RTU9 1775 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 CFAP73A6NFT4 308 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 ADAMTS3O15072 1205 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 CCDC6Q16204 474 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 IL17AQ16552 155 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 ERMARDQ5T6L9 678 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 NSRP1Q9H0G5 558 aaKnown RBP19.96■□□□□ 0.79
PTPN12-201ENST00000248594 RGL1Q9NZL6 768 aa19.96■□□□□ 0.79
PTPN12-201ENST00000248594 ITIH3Q06033 890 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 CWC25Q9NXE8 425 aaPredicted RBP19.95■□□□□ 0.78
PTPN12-201ENST00000248594 CYP27B1O15528 508 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 PRLRP16471 622 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 RABL6Q3YEC7 729 aaPredicted RBP19.95■□□□□ 0.78
PTPN12-201ENST00000248594 AKNAD1Q5T1N1 836 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 TTI2Q6NXR4 508 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 ARHGAP22Q7Z5H3 698 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 TMEM237Q96Q45 408 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 TTYH3Q9C0H2 523 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 TACC3Q9Y6A5 838 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 H0YGN5 161 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 ECEL1O95672 775 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 FESP07332 822 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 PDE6AP16499 860 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 ROR2Q01974 943 aaKnown RBP19.95■□□□□ 0.78
PTPN12-201ENST00000248594 VSIG1Q86XK7 387 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 MREGQ8N565 214 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 SNX24Q9Y343 169 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 NFS1Q9Y697 457 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 RPS6KL1Q9Y6S9 549 aa19.95■□□□□ 0.78
PTPN12-201ENST00000248594 MON2Q7Z3U7 1717 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 RARAP10276 462 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms