RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 MTA3Q9BTC8 594 aa10.64□□□□□ -0.71
IRF1-201ENST00000245414 KCNMB3Q9NPA1 279 aa10.64□□□□□ -0.71
IRF1-201ENST00000245414 TUBGCP4Q9UGJ1 667 aa10.64□□□□□ -0.71
IRF1-201ENST00000245414 LIMA1Q9UHB6 759 aaKnown RBP10.64□□□□□ -0.71
IRF1-201ENST00000245414 LRCH1Q9Y2L9 728 aa10.64□□□□□ -0.71
IRF1-201ENST00000245414 RGS16O15492 202 aaPredicted RBP10.63□□□□□ -0.71
IRF1-201ENST00000245414 PTF1AQ7RTS3 328 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 SAPCD2Q86UD0 394 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 MB21D1Q8N884 522 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 RBBP8NLQ8NC74 664 aaPredicted RBP10.63□□□□□ -0.71
IRF1-201ENST00000245414 CENPKQ9BS16 269 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 FGFR1OP2Q9NVK5 253 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 PCDHA13Q9Y5I0 950 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 A2ML1A8K2U0 1454 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 MAGEA13PA6NCF6 341 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 WASLO00401 505 aaPredicted RBP10.63□□□□□ -0.71
IRF1-201ENST00000245414 GNA14O95837 355 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 FTCDO95954 541 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 PABPC4Q13310 644 aaKnown RBP eCLIP10.63□□□□□ -0.71
IRF1-201ENST00000245414 LRRC14Q15048 493 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 FOXB2Q5VYV0 432 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 SESTD1Q86VW0 696 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 C2CD5Q86YS7 1000 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 CABLES1Q8TDN4 633 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 FAM192AQ9GZU8 254 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 STOML1Q9UBI4 398 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 ZNF180Q9UJW8 692 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 SH3GLB1Q9Y371 365 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
IRF1-201ENST00000245414 TRIM43BA6NCK2 446 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 SART1O43290 800 aaKnown RBP10.62□□□□□ -0.71
IRF1-201ENST00000245414 CCDC166P0CW27 439 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 PIGWQ7Z7B1 504 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 MICU3Q86XE3 530 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 LZICQ8WZA0 190 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 IQCDQ96DY2 449 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 RMDN2Q96LZ7 410 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 SLX1AQ9BQ83 275 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 DPH5Q9H2P9 285 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 ARHGEF3Q9NR81 526 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 CYP39A1Q9NYL5 469 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 KLHL14Q9P2G3 628 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 LARSQ9P2J5 1176 aaKnown RBP10.62□□□□□ -0.71
IRF1-201ENST00000245414 PDP2Q9P2J9 529 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 GMEB1Q9Y692 573 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 ARHGEF10O15013 1369 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 TPBGLP0DKB5 382 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 PRLRP16471 622 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 KIAA0753Q2KHM9 967 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 NT5DC1Q5TFE4 455 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 TRIM50Q86XT4 487 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 PTPRN2Q92932 1015 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 ARHGEF2Q92974 986 aaKnown RBP10.62□□□□□ -0.71
IRF1-201ENST00000245414 DNAJC7Q99615 494 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 SH2D4AQ9H788 454 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 SNRKQ9NRH2 765 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 CAPN11Q9UMQ6 739 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 MAP3K2Q9Y2U5 619 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 PTPRMP28827 1452 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 ALKQ9UM73 1620 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 TUBGCP6Q96RT7 1819 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 CEMIPQ8WUJ3 1361 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 METAP2P50579 478 aaKnown RBP eCLIP10.62□□□□□ -0.71
IRF1-201ENST00000245414 EHHADHQ08426 723 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 UAP1Q16222 522 aaPredicted RBP10.62□□□□□ -0.71
IRF1-201ENST00000245414 PTPROQ16827 1216 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 WASHC4Q2M389 1173 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 TDRD12Q587J7 1177 aaKnown RBP10.62□□□□□ -0.71
IRF1-201ENST00000245414 CCDC82Q8N4S0 544 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 FAM133AQ8N9E0 248 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 TRIM47Q96LD4 638 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 ZNF317Q96PQ6 595 aaPredicted RBP10.62□□□□□ -0.71
IRF1-201ENST00000245414 BRD8Q9H0E9 1235 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 CSRNP2Q9H175 543 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 METTL5Q9NRN9 209 aaKnown RBP10.62□□□□□ -0.71
IRF1-201ENST00000245414 PACSIN2Q9UNF0 486 aaPredicted RBP10.62□□□□□ -0.71
IRF1-201ENST00000245414 AMOTL2Q9Y2J4 779 aa10.62□□□□□ -0.71
IRF1-201ENST00000245414 E7ENQ6 273 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 SNX3O60493 162 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 PLEKP08567 350 aaPredicted RBP10.61□□□□□ -0.71
IRF1-201ENST00000245414 SH3BGRP55822 239 aaPredicted RBP10.61□□□□□ -0.71
IRF1-201ENST00000245414 MKL1Q969V6 931 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 MAP3K14Q99558 947 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 TRAIPQ9BWF2 469 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 MLXIPLQ9NP71 852 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 ARHGEF38Q9NXL2 777 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 TCP11X1B4DZS4 312 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 PPP1R3GB7ZBB8 358 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 KCNQ3O43525 872 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 OPHN1O60890 802 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 BAG3O95817 575 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 ZFYP08048 801 aaPredicted RBP10.61□□□□□ -0.71
IRF1-201ENST00000245414 GNAZP19086 355 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 SLCO1A2P46721 670 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 BNIP1Q12981 228 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 ZNF449Q6P9G9 518 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 C16orf87Q6PH81 154 aa10.61□□□□□ -0.71
IRF1-201ENST00000245414 ZNF554Q86TJ5 538 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms