RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 KDM3AQ9Y4C1 1321 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L15C9J2P7 530 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L13C9JLJ4 530 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L11C9JVI0 530 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L18D6R9N7 530 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L22D6RA61 530 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L17D6RBQ6 530 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L19D6RCP7 530 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L20D6RJB6 530 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 HLA-DOAP06340 250 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 MAGEA1P43355 309 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 GFPT1Q06210 699 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L24Q0WX57 530 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 ZSCAN26Q16670 478 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 HYIQ5T013 277 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L6PQ6QN14 398 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 ZFPM1Q8IX07 1006 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 ZDHHC15Q96MV8 337 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 GDAP1L1Q96MZ0 367 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 MED4Q9NPJ6 270 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 NLRC4Q9NPP4 1024 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 HPCAL4Q9UM19 191 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 KIAA1024Q9UPX6 916 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-202ENST00000244303 SIPA1L1O43166 1804 aa15.9■□□□□ 0.14
HIF3A-202ENST00000244303 VGLL3A8MV65 326 aa15.9■□□□□ 0.14
HIF3A-202ENST00000244303 H0YIN7 160 aa15.9■□□□□ 0.14
HIF3A-202ENST00000244303 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
HIF3A-202ENST00000244303 ASTE1Q2TB18 679 aaPredicted RBP15.9■□□□□ 0.14
HIF3A-202ENST00000244303 HGSNATQ68CP4 663 aa15.9■□□□□ 0.14
HIF3A-202ENST00000244303 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
HIF3A-202ENST00000244303 NFRKBQ6P4R8 1299 aa15.9■□□□□ 0.14
HIF3A-202ENST00000244303 NELFCDQ8IXH7 590 aa15.9■□□□□ 0.14
HIF3A-202ENST00000244303 BMP2KQ9NSY1 1161 aaPredicted RBP15.9■□□□□ 0.14
HIF3A-202ENST00000244303 CWC15Q9P013 229 aaKnown RBP15.9■□□□□ 0.14
HIF3A-202ENST00000244303 SALL4Q9UJQ4 1053 aa15.9■□□□□ 0.14
HIF3A-202ENST00000244303 NPHP3-ACAD11A0A0J9YXS1 232 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 POTEB3A0JP26 581 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 POTECB2RU33 542 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 PJA2O43164 708 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 RAD21O60216 631 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 MUM1L1Q5H9M0 696 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 POTEBQ6S5H4 581 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 CCNI2Q6ZMN8 369 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-202ENST00000244303 KIAA0825Q8IV33 1275 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 ANKRD13CQ8N6S4 541 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 ALS2CR12Q96Q35 445 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 OSBPL9Q96SU4 736 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 EDEM3Q9BZQ6 932 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-202ENST00000244303 PCDHAC2Q9Y5I4 1007 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 NOL4O94818 638 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 SYF2O95926 243 aaKnown RBP15.89■□□□□ 0.13
HIF3A-202ENST00000244303 PLA2G4BP0C869 781 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 PRLRP16471 622 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 AARSP49588 968 aaKnown RBP eCLIP15.89■□□□□ 0.13
HIF3A-202ENST00000244303 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-202ENST00000244303 QRICH1Q2TAL8 776 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 TDRD12Q587J7 1177 aaKnown RBP15.89■□□□□ 0.13
HIF3A-202ENST00000244303 STRIP1Q5VSL9 837 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 PSMB7Q99436 277 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 HINFPQ9BQA5 517 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 MRIQ9BWK5 157 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 CEP72Q9P209 647 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 PCDHA2Q9Y5H9 948 aa15.89■□□□□ 0.13
HIF3A-202ENST00000244303 ZC3H4Q9UPT8 1303 aaKnown RBP15.89■□□□□ 0.13
HIF3A-202ENST00000244303 SSU72P8A0A1W2PR75 194 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 CXCR5P32302 372 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 SLC1A4P43007 532 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 CACNB3P54284 484 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 RASSF7Q02833 373 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 EZH2Q15910 746 aaKnown RBP15.88■□□□□ 0.13
HIF3A-202ENST00000244303 ZNF572Q7Z3I7 529 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-202ENST00000244303 GPBP1Q86WP2 473 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 CCDC65Q8IXS2 484 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 MMGT1Q8N4V1 131 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 GOLGA5Q8TBA6 731 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 SELENOOQ9BVL4 669 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 EHD4Q9H223 541 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 KANSL2Q9H9L4 492 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 HYOU1Q9Y4L1 999 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 NCK2O43639 380 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 ECE2O60344 883 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 RNF40O75150 1001 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 ACTN2P35609 894 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 FKBP1AP62942 108 aaKnown RBP15.88■□□□□ 0.13
HIF3A-202ENST00000244303 SHROOM1Q2M3G4 852 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-202ENST00000244303 DACT2Q5SW24 774 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 CEP63Q96MT8 703 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 NAP1L4Q99733 375 aaKnown RBP15.88■□□□□ 0.13
HIF3A-202ENST00000244303 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
HIF3A-202ENST00000244303 DNAJC18Q9H819 358 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 FAM204AQ9H8W3 233 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 KCNMB3Q9NPA1 279 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 EHD2Q9NZN4 543 aa15.88■□□□□ 0.13
HIF3A-202ENST00000244303 FAM196BA6NMK8 535 aa15.87■□□□□ 0.13
HIF3A-202ENST00000244303 BUB1O43683 1085 aa15.87■□□□□ 0.13
HIF3A-202ENST00000244303 TLR2O60603 784 aa15.87■□□□□ 0.13
HIF3A-202ENST00000244303 TCP1P17987 556 aaKnown RBP15.87■□□□□ 0.13
HIF3A-202ENST00000244303 CYP11B2P19099 503 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms