RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 AOC2O75106 756 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 COBLO75128 1261 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 TOMM70O94826 608 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 MTMR1Q13613 665 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 CTTNQ14247 550 aaKnown RBP14.51□□□□□ -0.09
HIF3A-201ENST00000244302 POTEGQ6S5H5 508 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 SMYD4Q8IYR2 804 aaPredicted RBP14.51□□□□□ -0.09
HIF3A-201ENST00000244302 FAM133AQ8N9E0 248 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 AK8Q96MA6 479 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 PDCL3Q9H2J4 239 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 MAP3K20Q9NYL2 800 aaKnown RBP14.51□□□□□ -0.09
HIF3A-201ENST00000244302 CTAGE5O15320 804 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 CCDC192P0DO97 292 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 CCT6AP40227 531 aaKnown RBP14.5□□□□□ -0.09
HIF3A-201ENST00000244302 LUZP1Q86V48 1076 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 SLFN12Q8IYM2 578 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 CEP57L1Q8IYX8 460 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 FAM20AQ96MK3 541 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 EHMT1Q9H9B1 1298 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 TUBE1Q9UJT0 475 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 MAN1B1Q9UKM7 699 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 PNMA3Q9UL41 463 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 GAS7O60861 476 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 YY1P25490 414 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 SARSP49591 514 aaKnown RBP14.5□□□□□ -0.09
HIF3A-201ENST00000244302 ALDH5A1P51649 535 aaPredicted RBP14.5□□□□□ -0.09
HIF3A-201ENST00000244302 SP4Q02446 784 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 DPYDQ12882 1025 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 KRT79Q5XKE5 535 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 SEPT14Q6ZU15 432 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 HPS3Q969F9 1004 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 MMP19Q99542 508 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 NAP1L4Q99733 375 aaKnown RBP14.5□□□□□ -0.09
HIF3A-201ENST00000244302 PNMA2Q9UL42 364 aa14.5□□□□□ -0.09
HIF3A-201ENST00000244302 NPHP3-ACAD11A0A0J9YXS1 232 aa14.49□□□□□ -0.09
HIF3A-201ENST00000244302 TBX3O15119 743 aa14.49□□□□□ -0.09
HIF3A-201ENST00000244302 PTMAP06454 111 aaKnown RBP14.49□□□□□ -0.09
HIF3A-201ENST00000244302 TXLNAP40222 546 aa14.49□□□□□ -0.09
HIF3A-201ENST00000244302 IFNL1Q8IU54 200 aa14.49□□□□□ -0.09
HIF3A-201ENST00000244302 DYDC2Q96IM9 177 aa14.49□□□□□ -0.09
HIF3A-201ENST00000244302 EIF2AK1Q9BQI3 630 aaKnown RBP14.49□□□□□ -0.09
HIF3A-201ENST00000244302 SH2D3AQ9BRG2 576 aa14.49□□□□□ -0.09
HIF3A-201ENST00000244302 AP5Z1O43299 807 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 SLITRK3O94933 977 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 SLC25A27O95847 323 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 CCNE2O96020 404 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 CCND2P30279 289 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
HIF3A-201ENST00000244302 RAD51AP2Q09MP3 1159 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 B3GNT9Q6UX72 402 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 DOCK3Q8IZD9 2030 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 PIGOQ8TEQ8 1089 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 CBX8Q9HC52 389 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 KBTBD4Q9NVX7 518 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 DNAJC25-GNG10A0A024R161 153 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 TMEM150BA6NC51 233 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 KCTD2Q14681 263 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 TAF1CQ15572 869 aaPredicted RBP14.48□□□□□ -0.09
HIF3A-201ENST00000244302 TMEM119Q4V9L6 283 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 DYMQ7RTS9 669 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 BANK1Q8NDB2 785 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 CALML4Q96GE6 196 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 INPP4AQ96PE3 977 aaPredicted RBP14.48□□□□□ -0.09
HIF3A-201ENST00000244302 FBXO40Q9UH90 709 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 SLC45A1Q9Y2W3 748 aa14.48□□□□□ -0.09
HIF3A-201ENST00000244302 MYMKA6NI61 221 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 SSBP05455 408 aaKnown RBP eCLIP14.47□□□□□ -0.09
HIF3A-201ENST00000244302 FCER1AP12319 257 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 ADORA2AP29274 412 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 MTERF4Q7Z6M4 381 aaKnown RBP14.47□□□□□ -0.09
HIF3A-201ENST00000244302 TPH2Q8IWU9 490 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 SAMD3Q8N6K7 520 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 SPATA20Q8TB22 786 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 PARK7Q99497 189 aaKnown RBP14.47□□□□□ -0.09
HIF3A-201ENST00000244302 HSD17B14Q9BPX1 270 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 RAB34Q9BZG1 259 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 PDGFCQ9NRA1 345 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 MAPK8IP1Q9UQF2 711 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 R3HCC1Q9Y3T6 440 aaKnown RBP14.47□□□□□ -0.09
HIF3A-201ENST00000244302 MANSC4A6NHS7 340 aaPredicted RBP14.47□□□□□ -0.09
HIF3A-201ENST00000244302 BCRP11274 1271 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 CD44P16070 742 aaKnown RBP14.47□□□□□ -0.09
HIF3A-201ENST00000244302 KCNA2P16389 499 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 CTGFP29279 349 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 CAP1Q01518 475 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 SMARCE1Q969G3 411 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 MED15Q96RN5 788 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 MORF4L1Q9UBU8 362 aa14.47□□□□□ -0.09
HIF3A-201ENST00000244302 PFASO15067 1338 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 ZNFX1Q9P2E3 1918 aaKnown RBP14.46□□□□□ -0.09
HIF3A-201ENST00000244302 DYNC1I1O14576 645 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 KLRC4O43908 158 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 ARIH2O95376 493 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 ZNF165P49910 485 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 NLRP12P59046 1061 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 SETQ01105 290 aaPredicted RBP14.46□□□□□ -0.09
HIF3A-201ENST00000244302 CRHR2Q13324 411 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 PPP2R5CQ13362 524 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 UGCGQ16739 394 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 NT5DC1Q5TFE4 455 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms