RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 WDR64B1ANS9 1081 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 E9PMD0 336 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ACSL3O95573 720 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 EXOC8Q8IYI6 725 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 SSH3Q8TE77 659 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 CARD14Q9BXL6 1004 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 HSPD1P10809 573 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ARL4AP40617 200 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 PPP4R3CPQ6ZMV5 832 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 TLK1Q9UKI8 766 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 PTPRKQ15262 1439 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 PPP6R2O75170 966 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ZAP70P43403 619 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 DPCR1Q3MIW9 517 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 NBPF10Q6P3W6 841 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 CALR3Q96L12 384 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ASPRV1Q53RT3 343 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 INTUQ9ULD6 942 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ARHGAP31Q2M1Z3 1444 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ATRXP46100 2492 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 LAMC1P11047 1609 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ICE1Q9Y2F5 2266 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 TMEM247A6NEH6 219 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ARHGEF9O43307 516 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 CA4P22748 312 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 SLCO1A2P46721 670 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 GLE1Q53GS7 698 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 CENPUQ71F23 418 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 DNAAF3Q8N9W5 541 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 SUGCTQ9HAC7 445 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 PALD1Q9ULE6 856 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 SPDYE2BA6NHP3 402 aa7.27□□□□□ -1.24
CSMD2-201ENST00000241312 SPDYE6P0CI01 402 aa7.27□□□□□ -1.24
CSMD2-201ENST00000241312 PYGBP11216 843 aa7.27□□□□□ -1.24
CSMD2-201ENST00000241312 PLS3P13797 630 aa7.27□□□□□ -1.24
CSMD2-201ENST00000241312 LRRC63Q05C16 580 aa7.27□□□□□ -1.24
CSMD2-201ENST00000241312 CRLF3Q8IUI8 442 aa7.27□□□□□ -1.24
CSMD2-201ENST00000241312 CCDC24Q8N4L8 307 aa7.27□□□□□ -1.24
CSMD2-201ENST00000241312 RDH13Q8NBN7 331 aa7.27□□□□□ -1.24
CSMD2-201ENST00000241312 EIF4A3P38919 411 aaKnown RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ZBED6P86452 979 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 P2RX5Q93086 422 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 PAWRQ96IZ0 340 aaKnown RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 OLFM3Q96PB7 478 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 SLC38A10Q9HBR0 1119 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TRIM33Q9UPN9 1127 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 KIAA1024Q9UPX6 916 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 PRPSAP2O60256 369 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TOM1O60784 492 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 GCP02774 474 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 CACTINQ8WUQ7 758 aaKnown RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 CLIC6Q96NY7 704 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 MLXIPQ9HAP2 919 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ANLNQ9NQW6 1124 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 NDE1Q9NXR1 346 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 SUCLA2Q9P2R7 463 aaPredicted RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 SUN2Q9UH99 717 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 GJA3Q9Y6H8 435 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 MMEP08473 750 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 PSMC2P35998 433 aaKnown RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 POLE2P56282 527 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 MDM2Q00987 491 aaPredicted RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 C2orf54Q08AI8 447 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 GPATCH4Q5T3I0 446 aaKnown RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TEDDM1Q5T9Z0 273 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 SYNJ2BP-COX16A0A087WUM0 186 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 H3BRJ5 948 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 MAGEA9P43362 315 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 OCRLQ01968 901 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 IFRD2Q12894 506 aaPredicted RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 CASP8Q14790 479 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TRIM59Q8IWR1 403 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ZBTB18Q99592 522 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 COX16Q9P0S2 106 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ERBB4Q15303 1308 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TTC37Q6PGP7 1564 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 KRT38O76015 456 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 SLFN14P0C7P3 912 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TCIRG1Q13488 830 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 SPARCL1Q14515 664 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 FAM47AQ5JRC9 791 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ICE2Q659A1 982 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 PDXDC1Q6P996 788 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 CEP70Q8NHQ1 597 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TLR3O15455 904 aaKnown RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 C1orf146Q5VVC0 180 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ACRBPQ8NEB7 543 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ANKRD36BP1Q96IX9 119 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ING2Q9H160 280 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 PCDHA4Q9UN74 947 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 PLAAQ9Y263 795 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 RNF123Q5XPI4 1314 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 BASP1P80723 227 aaKnown RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 DYNC1I2Q13409 638 aaKnown RBP7.27□□□□□ -1.25
CSMD2-201ENST00000241312 FSCBQ5H9T9 825 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 CFAP36Q96G28 342 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ARHGEF37A1IGU5 675 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TAC1P20366 129 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 ARL4CP56559 192 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms