RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 FAM86B2P0C5J1 330 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 SPATA31C1P0DKV0 1188 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 BRD3Q15059 726 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 PRR16Q569H4 304 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 RSBN1LQ6PCB5 846 aaPredicted RBP17.92■□□□□ 0.46
UBE3D-201ENST00000237186 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 TRAPPC11Q7Z392 1133 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 FAM151AQ8WW52 585 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 GMLQ99445 158 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 EPC1Q9H2F5 836 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 KCTD10Q9H3F6 313 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.92■□□□□ 0.46
UBE3D-201ENST00000237186 PRR12Q9ULL5 1215 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 MYH7BA7E2Y1 1941 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 SSBP05455 408 aaKnown RBP eCLIP17.92■□□□□ 0.46
UBE3D-201ENST00000237186 STAT3P40763 770 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 VAV2P52735 878 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 UTP14CQ5TAP6 766 aaKnown RBP17.92■□□□□ 0.46
UBE3D-201ENST00000237186 CC2D1AQ6P1N0 951 aaPredicted RBP17.92■□□□□ 0.46
UBE3D-201ENST00000237186 SYT2Q8N9I0 419 aaPredicted RBP17.92■□□□□ 0.46
UBE3D-201ENST00000237186 SCFD1Q8WVM8 642 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 HNRNPLLQ8WVV9 542 aaKnown RBP17.92■□□□□ 0.46
UBE3D-201ENST00000237186 CCDC42Q96M95 316 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 TMOD2Q9NZR1 351 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 TRIM10Q9UDY6 481 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 RAB21Q9UL25 225 aa17.92■□□□□ 0.46
UBE3D-201ENST00000237186 TRAF5O00463 557 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 TUBBP07437 444 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 VIL1P09327 827 aaKnown RBP17.91■□□□□ 0.46
UBE3D-201ENST00000237186 SNAP25P60880 206 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 IKQ13123 557 aaPredicted RBP17.91■□□□□ 0.46
UBE3D-201ENST00000237186 EDRF1Q3B7T1 1238 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 HERC4Q5GLZ8 1057 aaPredicted RBP17.91■□□□□ 0.46
UBE3D-201ENST00000237186 FKBP1CQ5VVH2 108 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 KIAA1328Q86T90 577 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 SLC16A10Q8TF71 515 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 BAP1Q92560 729 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 JAKMIP2Q96AA8 810 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 PSMD1Q99460 953 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 TSGA10Q9BZW7 698 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 ARHGEF10LQ9HCE6 1279 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 PUF60Q9UHX1 559 aaKnown RBP17.91■□□□□ 0.46
UBE3D-201ENST00000237186 DNM3Q9UQ16 869 aa17.91■□□□□ 0.46
UBE3D-201ENST00000237186 CTAGE15A4D2H0 777 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 EPHB6O15197 1021 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 MSH4O15457 936 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 PLA2G6O60733 806 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 CTAGE8P0CG41 777 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 STAT2P52630 851 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 DMTNQ08495 405 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 KCNMA1Q12791 1236 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 USH1GQ495M9 461 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 CTAGE6Q86UF2 777 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 TRIM59Q8IWR1 403 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 CTAGE4Q8IX94 777 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 POLR3CQ9BUI4 534 aaPredicted RBP17.9■□□□□ 0.46
UBE3D-201ENST00000237186 FGFBP2Q9BYJ0 223 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 LACRTQ9GZZ8 138 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 MMRN2Q9H8L6 949 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 ANKZF1Q9H8Y5 726 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 ARFGAP3Q9NP61 516 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 EMILIN3Q9NT22 766 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 ARHGAP20Q9P2F6 1191 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 POTEFA5A3E0 1075 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 RCCD1A6NED2 376 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 ZNF263O14978 683 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 POTEIP0CG38 1075 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 GIT2Q14161 759 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 POTEGQ6S5H5 508 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 POTEEQ6S8J3 1075 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 RTKN2Q8IZC4 609 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 SYN2Q92777 582 aaPredicted RBP17.9■□□□□ 0.46
UBE3D-201ENST00000237186 NUCKS1Q9H1E3 243 aaKnown RBP17.9■□□□□ 0.46
UBE3D-201ENST00000237186 FAM207AQ9NSI2 230 aaPredicted RBP17.9■□□□□ 0.46
UBE3D-201ENST00000237186 VAV3Q9UKW4 847 aa17.9■□□□□ 0.46
UBE3D-201ENST00000237186 ANO9A1A5B4 782 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 C21orf2O43822 256 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 TBC1D12O60347 775 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 TBC1D8O95759 1140 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 PLA2G4AP47712 749 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 KIF5AQ12840 1032 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 SPA17Q15506 151 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 NEK11Q8NG66 645 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 UBXN6Q9BZV1 441 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 ZNF70Q9UC06 446 aaPredicted RBP17.89■□□□□ 0.45
UBE3D-201ENST00000237186 FAM184BQ9ULE4 1060 aa17.89■□□□□ 0.45
UBE3D-201ENST00000237186 IGLV3-22A0A075B6J6 115 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 NPHP3-ACAD11A0A0J9YXS1 232 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 SSU72P8A0A1W2PR75 194 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 FAM193AP78312 1265 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
UBE3D-201ENST00000237186 ASTE1Q2TB18 679 aaPredicted RBP17.88■□□□□ 0.45
UBE3D-201ENST00000237186 VPS33BQ9H267 617 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 ZSWIM4Q9H7M6 989 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 GOPCQ9HD26 462 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 HDAC9Q9UKV0 1011 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 TRAF3IP3Q9Y228 551 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 SAR1BQ9Y6B6 198 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 TCP10L2B9ZVM9 353 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 ECE1P42892 770 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms