RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 KIF5AQ12840 1032 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 SMC1AQ14683 1233 aaKnown RBP10.95□□□□□ -0.66
MDH1-201ENST00000233114 CCDC96Q2M329 555 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 MAP9Q49MG5 647 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 CDC42EP5Q6NZY7 148 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 LRRC55Q6ZSA7 311 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 SLFN12Q8IYM2 578 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 MYOCDQ8IZQ8 938 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 NLGN1Q8N2Q7 840 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 CERS5Q8N5B7 392 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 TRIM58Q8NG06 486 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 DDX12PQ92771 950 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 SYN2Q92777 582 aaPredicted RBP10.95□□□□□ -0.66
MDH1-201ENST00000233114 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
MDH1-201ENST00000233114 CCDC42Q96M95 316 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
MDH1-201ENST00000233114 PSTPIP2Q9H939 334 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 SLC39A2Q9NP94 309 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 AGPAT5Q9NUQ2 364 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 SYNPO2Q9UMS6 1093 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 ARFGEF1Q9Y6D6 1849 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
MDH1-201ENST00000233114 SSU72P8A0A1W2PR75 194 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 TBX3O15119 743 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 TBC1D12O60347 775 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 PPP1R11O60927 126 aaPredicted RBP10.95□□□□□ -0.66
MDH1-201ENST00000233114 PRLRP16471 622 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 CYP2C19P33261 490 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 PDE6BP35913 854 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 FKBP3Q00688 224 aaKnown RBP10.95□□□□□ -0.66
MDH1-201ENST00000233114 ZCWPW2Q504Y3 356 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 APOBEC3HQ6NTF7 200 aaKnown RBP10.95□□□□□ -0.66
MDH1-201ENST00000233114 PODNQ7Z5L7 613 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 CCDC65Q8IXS2 484 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 ZC3H3Q8IXZ2 948 aaKnown RBP10.95□□□□□ -0.66
MDH1-201ENST00000233114 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 HAS1Q92839 578 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 DNAJC19Q96DA6 116 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 KANSL2Q9H9L4 492 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 L1RE1Q9UN81 338 aa10.95□□□□□ -0.66
MDH1-201ENST00000233114 ATAD5Q96QE3 1844 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 PITPNM2Q9BZ72 1349 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 SIPA1L1O43166 1804 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 TACC1O75410 805 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 OAS2P29728 719 aaKnown RBP10.94□□□□□ -0.66
MDH1-201ENST00000233114 USP14P54578 494 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 COASYQ13057 564 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 FAM26FQ5R3K3 315 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 HAUS3Q68CZ6 603 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 ZNF572Q7Z3I7 529 aaPredicted RBP10.94□□□□□ -0.66
MDH1-201ENST00000233114 FLAD1Q8NFF5 587 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 SECISBP2LQ93073 1101 aaKnown RBP10.94□□□□□ -0.66
MDH1-201ENST00000233114 PNKPQ96T60 521 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 PSMD1Q99460 953 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 IDI2Q9BXS1 227 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 EPC1Q9H2F5 836 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 VIPAS39Q9H9C1 493 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 KCNMB3Q9NPA1 279 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 PSD3Q9NYI0 1048 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 FAM184BQ9ULE4 1060 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 PCDHA12Q9UN75 941 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 JRKLQ9Y4A0 524 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 COL4A3BPQ9Y5P4 624 aa10.94□□□□□ -0.66
MDH1-201ENST00000233114 PJA2O43164 708 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 MARCH6O60337 910 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 ABL1P00519 1130 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 FOSP01100 380 aaPredicted RBP10.93□□□□□ -0.66
MDH1-201ENST00000233114 IDEP14735 1019 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 TRAF1Q13077 416 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 DSG2Q14126 1118 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 GMCL1P1Q8NEA9 526 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 NEK11Q8NG66 645 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 ERMNQ8TAM6 284 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 MASTLQ96GX5 879 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 SH2D4AQ9H788 454 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 ZSWIM4Q9H7M6 989 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 LUC7LQ9NQ29 371 aaKnown RBP10.93□□□□□ -0.66
MDH1-201ENST00000233114 PANK4Q9NVE7 773 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 CEP72Q9P209 647 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 PI4KBQ9UBF8 816 aa10.93□□□□□ -0.66
MDH1-201ENST00000233114 COL11A2P13942 1736 aaPredicted RBP10.93□□□□□ -0.66
MDH1-201ENST00000233114 FRMD3A2A2Y4 597 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 USP17L10C9JJH3 530 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 ATP1A1P05023 1023 aaKnown RBP10.92□□□□□ -0.66
MDH1-201ENST00000233114 CRKP46108 304 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 MMP14P50281 582 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 UBE2SQ16763 222 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 QRICH1Q2TAL8 776 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 EDRF1Q3B7T1 1238 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 CCDC70Q6NSX1 233 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 PDXDC1Q6P996 788 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 TMEM179Q6ZVK1 233 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 DYMQ7RTS9 669 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 BAP1Q92560 729 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 EXOC4Q96A65 974 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 GMCL1Q96IK5 515 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 ALS2CR12Q96Q35 445 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 ANO3Q9BYT9 981 aa10.92□□□□□ -0.66
MDH1-201ENST00000233114 IFIH1Q9BYX4 1025 aaKnown RBP10.92□□□□□ -0.66
MDH1-201ENST00000233114 MED4Q9NPJ6 270 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms