RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 EPHX2P34913 555 aa27.65■■■□□ 2.02
RUNDC3A-201ENST00000225441 USP17L2Q6R6M4 530 aa27.65■■■□□ 2.02
RUNDC3A-201ENST00000225441 CCDC84Q86UT8 332 aaPredicted RBP27.65■■■□□ 2.02
RUNDC3A-201ENST00000225441 GUF1Q8N442 669 aaKnown RBP27.65■■■□□ 2.02
RUNDC3A-201ENST00000225441 JAKMIP2Q96AA8 810 aa27.65■■■□□ 2.02
RUNDC3A-201ENST00000225441 PURBQ96QR8 312 aaKnown RBP27.65■■■□□ 2.02
RUNDC3A-201ENST00000225441 PNKPQ96T60 521 aa27.65■■■□□ 2.02
RUNDC3A-201ENST00000225441 TECP42680 631 aa27.64■■■□□ 2.02
RUNDC3A-201ENST00000225441 LRRC63Q05C16 580 aa27.64■■■□□ 2.02
RUNDC3A-201ENST00000225441 CALCRLQ16602 461 aa27.64■■■□□ 2.02
RUNDC3A-201ENST00000225441 MIIPQ5JXC2 388 aa27.64■■■□□ 2.02
RUNDC3A-201ENST00000225441 DCAF15Q66K64 600 aa27.64■■■□□ 2.02
RUNDC3A-201ENST00000225441 PIGSQ96S52 555 aa27.64■■■□□ 2.02
RUNDC3A-201ENST00000225441 NAP1L4Q99733 375 aaKnown RBP27.64■■■□□ 2.02
RUNDC3A-201ENST00000225441 ABL1P00519 1130 aa27.64■■■□□ 2.01
RUNDC3A-201ENST00000225441 ADCY7P51828 1080 aa27.64■■■□□ 2.01
RUNDC3A-201ENST00000225441 PRAMEF18Q5VWM3 479 aa27.64■■■□□ 2.01
RUNDC3A-201ENST00000225441 IQCEQ6IPM2 695 aa27.64■■■□□ 2.01
RUNDC3A-201ENST00000225441 DCPSQ96C86 337 aaKnown RBP27.64■■■□□ 2.01
RUNDC3A-201ENST00000225441 PLIN2Q99541 437 aa27.64■■■□□ 2.01
RUNDC3A-201ENST00000225441 VIPAS39Q9H9C1 493 aa27.64■■■□□ 2.01
RUNDC3A-201ENST00000225441 NHEJ1Q9H9Q4 299 aaPredicted RBP27.64■■■□□ 2.01
RUNDC3A-201ENST00000225441 LRWD1Q9UFC0 647 aa27.64■■■□□ 2.01
RUNDC3A-201ENST00000225441 POLR3GO15318 223 aaPredicted RBP27.63■■■□□ 2.01
RUNDC3A-201ENST00000225441 MAP9Q49MG5 647 aa27.63■■■□□ 2.01
RUNDC3A-201ENST00000225441 RIC8AQ9NPQ8 531 aa27.63■■■□□ 2.01
RUNDC3A-201ENST00000225441 RASSF10A6NK89 507 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 SYNPO2Q9UMS6 1093 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 SCN4AP35499 1836 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 IQCA1LA6NCM1 817 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 ASNSP08243 561 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 VAV2P52735 878 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 USP14P54578 494 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 GRB10Q13322 594 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 PPP4R3AQ6IN85 833 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 RUBCNQ92622 972 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 CDK5RAP3Q96JB5 506 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 ZNF341Q9BYN7 854 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 ABCB6Q9NP58 842 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 PLAGL2Q9UPG8 496 aa27.62■■■□□ 2.01
RUNDC3A-201ENST00000225441 WDR90Q96KV7 1748 aa27.61■■■□□ 2.01
RUNDC3A-201ENST00000225441 ZNF543Q08ER8 600 aa27.61■■■□□ 2.01
RUNDC3A-201ENST00000225441 SPA17Q15506 151 aa27.61■■■□□ 2.01
RUNDC3A-201ENST00000225441 MAN2A1Q16706 1144 aa27.61■■■□□ 2.01
RUNDC3A-201ENST00000225441 VWA3BQ502W6 1294 aa27.61■■■□□ 2.01
RUNDC3A-201ENST00000225441 KIAA0895Q8NCT3 520 aa27.61■■■□□ 2.01
RUNDC3A-201ENST00000225441 LARP4BQ92615 738 aaKnown RBP27.61■■■□□ 2.01
RUNDC3A-201ENST00000225441 ARHGEF10LQ9HCE6 1279 aa27.61■■■□□ 2.01
RUNDC3A-201ENST00000225441 BLOC1S4Q9NUP1 217 aa27.61■■■□□ 2.01
RUNDC3A-201ENST00000225441 FRMPD2Q68DX3 1309 aaPredicted RBP27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 USO1O60763 962 aaKnown RBP27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 KIF5AQ12840 1032 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 SULF1Q8IWU6 871 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 GMCL1P1Q8NEA9 526 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 ZC3H15Q8WU90 426 aaKnown RBP27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 GLT8D2Q9H1C3 349 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 SEMA6BQ9H3T3 888 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 TAF1DQ9H5J8 278 aaPredicted RBP27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 GINM1Q9NU53 330 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 AGPAT5Q9NUQ2 364 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 SSC5DA1L4H1 1573 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 A0A1W2PRG0 241 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 CTNND1O60716 968 aaKnown RBP27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 LCA5LO95447 670 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 PRLRP16471 622 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 VSNL1P62760 191 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 SUPT20HL1Q3ZLR7 823 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 SLFN13Q68D06 897 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 POTEDQ86YR6 584 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 DCAF4Q8WV16 495 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 PCMTD1Q96MG8 357 aaPredicted RBP27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 MED4Q9NPJ6 270 aa27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 BIN2Q9UBW5 565 aaPredicted RBP27.6■■■□□ 2.01
RUNDC3A-201ENST00000225441 POTECB2RU33 542 aa27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 FCER1AP12319 257 aa27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 GCFC2P16383 781 aaKnown RBP27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 ITIH3Q06033 890 aa27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 TMEM119Q4V9L6 283 aa27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 KRT79Q5XKE5 535 aa27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 RAD54LQ92698 747 aa27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 PNMA5Q96PV4 448 aa27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 ZNF112Q9UJU3 913 aa27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 ATAD5Q96QE3 1844 aa27.59■■■□□ 2.01
RUNDC3A-201ENST00000225441 PNMA6FA0A0J9YX94 578 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 F5H6K3 240 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 RHOXF2BP0C7M4 288 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 TXKP42681 527 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 KLRC3Q07444 240 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 GPATCH4Q5T3I0 446 aaKnown RBP27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 TRIM58Q8NG06 486 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 CCDC42Q96M95 316 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 TSG101Q99816 390 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 RHOXF2Q9BQY4 288 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 CPVLQ9H3G5 476 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 SIK3Q9Y2K2 1263 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 TMX2Q9Y320 296 aa27.58■■■□□ 2.01
RUNDC3A-201ENST00000225441 POLR2AP24928 1970 aaKnown RBP27.58■■■□□ 2
RUNDC3A-201ENST00000225441 ADM5C9JUS6 153 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 EHHADHQ08426 723 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms