RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 STK17AQ9UEE5 414 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 TYW5A2RUC4 315 aaKnown RBP20.1■□□□□ 0.81
CLIP2-201ENST00000223398 DSTYKQ6XUX3 929 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 UHMK1Q8TAS1 419 aaKnown RBP20.1■□□□□ 0.81
CLIP2-201ENST00000223398 ELP3Q9H9T3 547 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 RPF1Q9H9Y2 349 aaKnown RBP20.1■□□□□ 0.81
CLIP2-201ENST00000223398 SCAF8Q9UPN6 1271 aaKnown RBP20.1■□□□□ 0.81
CLIP2-201ENST00000223398 XPAP23025 273 aaPredicted RBP20.1■□□□□ 0.81
CLIP2-201ENST00000223398 AFAP1L2Q8N4X5 818 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 RAB17Q9H0T7 212 aa20.1■□□□□ 0.81
CLIP2-201ENST00000223398 UBE2TQ9NPD8 197 aaPredicted RBP20.1■□□□□ 0.81
CLIP2-201ENST00000223398 MAGED2Q9UNF1 606 aaPredicted RBP20.1■□□□□ 0.81
CLIP2-201ENST00000223398 CUL4BQ13620 913 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 TMTC3Q6ZXV5 915 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 LINC00301Q8NCQ3 95 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 GLI2P10070 1586 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 MYO1FO00160 1098 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 DENND2CQ68D51 928 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 NECTIN1Q15223 517 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 DPCR1Q3MIW9 517 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 MICALL1Q8N3F8 863 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 ANKRD42Q8N9B4 389 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 C1orf167Q5SNV9 1468 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 MYO1EQ12965 1108 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 ZNF653Q96CK0 615 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 DHTKD1Q96HY7 919 aaPredicted RBP20.09■□□□□ 0.81
CLIP2-201ENST00000223398 FBXO40Q9UH90 709 aa20.09■□□□□ 0.81
CLIP2-201ENST00000223398 AFAP1L1Q8TED9 768 aa20.08■□□□□ 0.81
CLIP2-201ENST00000223398 ZBTB12Q9Y330 459 aaPredicted RBP20.08■□□□□ 0.81
CLIP2-201ENST00000223398 MAD1L1Q9Y6D9 718 aa20.08■□□□□ 0.81
CLIP2-201ENST00000223398 EHHADHQ08426 723 aa20.08■□□□□ 0.81
CLIP2-201ENST00000223398 KRT71Q3SY84 523 aa20.08■□□□□ 0.81
CLIP2-201ENST00000223398 SLC38A10Q9HBR0 1119 aa20.08■□□□□ 0.81
CLIP2-201ENST00000223398 HYOU1Q9Y4L1 999 aa20.08■□□□□ 0.81
CLIP2-201ENST00000223398 SLFN14P0C7P3 912 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 RCSD1Q6JBY9 416 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 MARCH10Q8NA82 808 aaPredicted RBP20.08■□□□□ 0.8
CLIP2-201ENST00000223398 LRRC4Q9HBW1 653 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 IQCA1LA6NCM1 817 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 CCDC160A6NGH7 325 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 ELF1P32519 619 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 HMGCS2P54868 508 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 ZNF658Q5TYW1 1059 aaPredicted RBP20.08■□□□□ 0.8
CLIP2-201ENST00000223398 LINC00116Q8NCU8 138 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 TIGD1Q96MW7 591 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 TMEM260Q9NX78 707 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 GCNT4Q9P109 453 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 PPP2R2CQ9Y2T4 447 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 POTEMA6NI47 508 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 GFPT2O94808 682 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 PLCB4Q15147 1175 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 HEXIM2Q96MH2 286 aaKnown RBP20.08■□□□□ 0.8
CLIP2-201ENST00000223398 MAN1B1Q9UKM7 699 aa20.08■□□□□ 0.8
CLIP2-201ENST00000223398 F5H6K3 240 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 FKBP3Q00688 224 aaKnown RBP20.07■□□□□ 0.8
CLIP2-201ENST00000223398 KLRC3Q07444 240 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 MMP19Q99542 508 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 SLITRK6Q9H5Y7 841 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 FNDC3AQ9Y2H6 1198 aaKnown RBP20.07■□□□□ 0.8
CLIP2-201ENST00000223398 I3L4J1 428 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 RINT1Q6NUQ1 792 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 CCNYQ8ND76 341 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 CCDC94Q9BW85 323 aaPredicted RBP20.07■□□□□ 0.8
CLIP2-201ENST00000223398 CNOT7Q9UIV1 285 aaKnown RBP20.07■□□□□ 0.8
CLIP2-201ENST00000223398 PTPN22Q9Y2R2 807 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 TULP4Q9NRJ4 1543 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 BNIP3LO60238 219 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 PRAMEF18Q5VWM3 479 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 OR6B2Q6IFH4 312 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 PRR5LQ6MZQ0 368 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 SPATA31A6Q5VVP1 1343 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 ZBBXA8MT70 800 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 PSMD6Q15008 389 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 TBC1D16Q8TBP0 767 aa20.07■□□□□ 0.8
CLIP2-201ENST00000223398 MAP7D3Q8IWC1 876 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 ENAHQ8N8S7 591 aaPredicted RBP20.06■□□□□ 0.8
CLIP2-201ENST00000223398 MXD3Q9BW11 206 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 SPATA31A1Q5TZJ5 1347 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 ZNF131P52739 623 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 FOXO4P98177 505 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 SDCCAG8Q86SQ7 713 aaPredicted RBP20.06■□□□□ 0.8
CLIP2-201ENST00000223398 FAM133AQ8N9E0 248 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 EPN1Q9Y6I3 576 aaPredicted RBP20.06■□□□□ 0.8
CLIP2-201ENST00000223398 MXI1P50539 228 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 NSUN6Q8TEA1 469 aaKnown RBP20.06■□□□□ 0.8
CLIP2-201ENST00000223398 GRK7Q8WTQ7 553 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 RPAP1Q9BWH6 1393 aaPredicted RBP20.06■□□□□ 0.8
CLIP2-201ENST00000223398 RUFY4Q6ZNE9 571 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 ATP2A3Q93084 1043 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 ZNRF3Q9ULT6 936 aa20.06■□□□□ 0.8
CLIP2-201ENST00000223398 ANXA13P27216 316 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 DYNLT1P63172 113 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 SIX6OS1Q8N1H7 587 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 BUB1BO60566 1050 aaPredicted RBP20.05■□□□□ 0.8
CLIP2-201ENST00000223398 MAPK4P31152 587 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 NOP9Q86U38 636 aaKnown RBP20.05■□□□□ 0.8
CLIP2-201ENST00000223398 CCDC68Q9H2F9 335 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 LMNB1P20700 586 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 AP3B2Q13367 1082 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 SRPRBQ9Y5M8 271 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms