RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 SAMD3Q8N6K7 520 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 MB21D1Q8N884 522 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 CCDC150Q8NCX0 1101 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 SLC5A5Q92911 643 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 CCDC34Q96HJ3 373 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 PKD2L1Q9P0L9 805 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 DOCK5Q9H7D0 1870 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 PCNTO95613 3336 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 POTEB3A0JP26 581 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 UNCXA6NJT0 531 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 CTIFO43310 598 aaKnown RBP16.95■□□□□ 0.3
PAF1-201ENST00000221265 PSMD10O75832 226 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 Q3C1V9 767 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 TKFCQ3LXA3 575 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 CHADLQ6NUI6 762 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 POTEBQ6S5H4 581 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 NYAP1Q6ZVC0 841 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 MTERF4Q7Z6M4 381 aaKnown RBP16.95■□□□□ 0.3
PAF1-201ENST00000221265 RIOX2Q8IUF8 465 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 SMYD4Q8IYR2 804 aaPredicted RBP16.95■□□□□ 0.3
PAF1-201ENST00000221265 CCAR2Q8N163 923 aaKnown RBP16.95■□□□□ 0.3
PAF1-201ENST00000221265 CDK5RAP3Q96JB5 506 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 MOV10L1Q9BXT6 1211 aaKnown RBP16.95■□□□□ 0.3
PAF1-201ENST00000221265 KCNH7Q9NS40 1196 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 FANCLQ9NW38 375 aa16.95■□□□□ 0.3
PAF1-201ENST00000221265 ZNFX1Q9P2E3 1918 aaKnown RBP16.95■□□□□ 0.3
PAF1-201ENST00000221265 UBASH3AP57075 661 aa16.94■□□□□ 0.3
PAF1-201ENST00000221265 MCM6Q14566 821 aa16.94■□□□□ 0.3
PAF1-201ENST00000221265 LRCH2Q5VUJ6 765 aa16.94■□□□□ 0.3
PAF1-201ENST00000221265 CEP135Q66GS9 1140 aa16.94■□□□□ 0.3
PAF1-201ENST00000221265 BRI3BPQ8WY22 251 aa16.94■□□□□ 0.3
PAF1-201ENST00000221265 ZNF577Q9BSK1 485 aa16.94■□□□□ 0.3
PAF1-201ENST00000221265 TRMT1Q9NXH9 659 aaKnown RBP16.94■□□□□ 0.3
PAF1-201ENST00000221265 PAXBP1Q9Y5B6 917 aa16.94■□□□□ 0.3
PAF1-201ENST00000221265 UBIAD1Q9Y5Z9 338 aa16.94■□□□□ 0.3
PAF1-201ENST00000221265 CHMP2AO43633 222 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 CNTN2Q02246 1040 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 OTOP1Q7RTM1 612 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 NCAPG2Q86XI2 1143 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 GSDMAQ96QA5 445 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 KIAA1024Q9UPX6 916 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 ASTN1O14525 1302 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 CCL15-CCL14A0A0B4J2E2 113 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 POTEFA5A3E0 1075 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 IPO5O00410 1097 aaKnown RBP16.93■□□□□ 0.3
PAF1-201ENST00000221265 SERPINC1P01008 464 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 RPN1P04843 607 aaKnown RBP16.93■□□□□ 0.3
PAF1-201ENST00000221265 SPATA31C1P0DKV0 1188 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 SETQ01105 290 aaPredicted RBP16.93■□□□□ 0.3
PAF1-201ENST00000221265 CCL15Q16663 113 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 POTEGQ6S5H5 508 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 CATSPER3Q86XQ3 398 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 CHST13Q8NET6 341 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 CUEDC2Q9H467 287 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 RABGAP1Q9Y3P9 1069 aa16.93■□□□□ 0.3
PAF1-201ENST00000221265 BTBD19C9JJ37 291 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 E9PMD0 336 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 CBFA2T2O43439 604 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 KLRC4O43908 158 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 GAS7O60861 476 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 NR3C2P08235 984 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 CD44P16070 742 aaKnown RBP16.92■□□□□ 0.3
PAF1-201ENST00000221265 ERCC3P19447 782 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 OSBPP22059 807 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 SFPQP23246 707 aaKnown RBP eCLIP16.92■□□□□ 0.3
PAF1-201ENST00000221265 CYP4A11Q02928 519 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 FSTL1Q12841 308 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 PTPN14Q15678 1187 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 HYIQ5T013 277 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 SPRYD7Q5W111 196 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 E4F1Q66K89 784 aaPredicted RBP16.92■□□□□ 0.3
PAF1-201ENST00000221265 ANKRD35Q8N283 1001 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 LARP4BQ92615 738 aaKnown RBP16.92■□□□□ 0.3
PAF1-201ENST00000221265 RAD54LQ92698 747 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 TRIM9Q9C026 710 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 JADE2Q9NQC1 790 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 RGL1Q9NZL6 768 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 STK17AQ9UEE5 414 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 DDX39AO00148 427 aaKnown RBP16.92■□□□□ 0.3
PAF1-201ENST00000221265 CETPP11597 493 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 GTF2A2P52657 109 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 HUNKP57058 714 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 PABPC4Q13310 644 aaKnown RBP eCLIP16.92■□□□□ 0.34e-6■■■□□ 14.7
PAF1-201ENST00000221265 ITGB3BPQ13352 177 aaPredicted RBP16.92■□□□□ 0.3
PAF1-201ENST00000221265 VSIG10LQ86VR7 867 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 TRIML1Q8N9V2 468 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 MLKLQ8NB16 471 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 UNC45AQ9H3U1 944 aa16.92■□□□□ 0.3
PAF1-201ENST00000221265 MCM3APO60318 1980 aa16.91■□□□□ 0.3
PAF1-201ENST00000221265 WDR81Q562E7 1941 aa16.91■□□□□ 0.3
PAF1-201ENST00000221265 TESPA1A2RU30 521 aaPredicted RBP16.91■□□□□ 0.3
PAF1-201ENST00000221265 MYMKA6NI61 221 aa16.91■□□□□ 0.3
PAF1-201ENST00000221265 PDHXO00330 501 aa16.91■□□□□ 0.3
PAF1-201ENST00000221265 DHX15O43143 795 aaKnown RBP16.91■□□□□ 0.3
PAF1-201ENST00000221265 BCRP11274 1271 aa16.91■□□□□ 0.3
PAF1-201ENST00000221265 PSMC6P62333 389 aa16.91■□□□□ 0.3
PAF1-201ENST00000221265 PPP2R5CQ13362 524 aa16.91■□□□□ 0.3
PAF1-201ENST00000221265 MTMR1Q13613 665 aa16.91■□□□□ 0.3
PAF1-201ENST00000221265 NSUN6Q8TEA1 469 aaKnown RBP16.91■□□□□ 0.3
PAF1-201ENST00000221265 MED15Q96RN5 788 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms