RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 FKBP3Q00688 224 aaKnown RBP16.18■□□□□ 0.18
CNOT3-201ENST00000221232 CERKLQ49MI3 558 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-201ENST00000221232 PPP4R3AQ6IN85 833 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 CCDC84Q86UT8 332 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-201ENST00000221232 BAP1Q92560 729 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 LRRC1Q9BTT6 524 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 COL4A3BPQ9Y5P4 624 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 A0A1W2PQJ5 194 aa16.17■□□□□ 0.18
CNOT3-201ENST00000221232 LRRC63Q05C16 580 aa16.17■□□□□ 0.18
CNOT3-201ENST00000221232 CDC37Q16543 378 aaPredicted RBP16.17■□□□□ 0.18
CNOT3-201ENST00000221232 CYP2W1Q8TAV3 490 aa16.17■□□□□ 0.18
CNOT3-201ENST00000221232 GBP3Q9H0R5 595 aa16.17■□□□□ 0.18
CNOT3-201ENST00000221232 SH2D4AQ9H788 454 aa16.17■□□□□ 0.18
CNOT3-201ENST00000221232 SFI1A8K8P3 1242 aa16.17■□□□□ 0.18
CNOT3-201ENST00000221232 CASP5P51878 434 aa16.17■□□□□ 0.18
CNOT3-201ENST00000221232 GPATCH4Q5T3I0 446 aaKnown RBP16.17■□□□□ 0.18
CNOT3-201ENST00000221232 DHX37Q8IY37 1157 aaKnown RBP16.17■□□□□ 0.18
CNOT3-201ENST00000221232 PACSIN2Q9UNF0 486 aaPredicted RBP16.17■□□□□ 0.18
CNOT3-201ENST00000221232 ACTN1P12814 892 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 CAPN2P17655 700 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 ADAM9Q13443 819 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 RAPGEF1Q13905 1077 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 CREG2Q8IUH2 290 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 PROM2Q8N271 834 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 ANO3Q9BYT9 981 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 EMILIN3Q9NT22 766 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 SNX12Q9UMY4 172 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.16■□□□□ 0.18
CNOT3-201ENST00000221232 hCG_1984214I3L0E3 225 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 EPS15P42566 896 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 CKAP4Q07065 602 aaKnown RBP16.16■□□□□ 0.18
CNOT3-201ENST00000221232 SEMA3FQ13275 785 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 FIGNQ5HY92 759 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 FAM83BQ5T0W9 1011 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 PDXDC1Q6P996 788 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 ZNF713Q8N859 430 aaPredicted RBP16.16■□□□□ 0.18
CNOT3-201ENST00000221232 DMGDHQ9UI17 866 aaKnown RBP16.16■□□□□ 0.18
CNOT3-201ENST00000221232 MYH1P12882 1939 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 CCDC181Q5TID7 509 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 WDR93Q6P2C0 686 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 CCDC65Q8IXS2 484 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 FAM133AQ8N9E0 248 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 TRIM58Q8NG06 486 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 SCFD1Q8WVM8 642 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 TBC1D5Q92609 795 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
CNOT3-201ENST00000221232 IKZF4Q9H2S9 585 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 JRKLQ9Y4A0 524 aa16.16■□□□□ 0.18
CNOT3-201ENST00000221232 TLR2O60603 784 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 FTCDO95954 541 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 CYP11B2P19099 503 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 EHHADHQ08426 723 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 ARSHQ5FYA8 562 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 OSBPL9Q96SU4 736 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 NOL4O94818 638 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 PRPF6O94906 941 aaKnown RBP16.15■□□□□ 0.18
CNOT3-201ENST00000221232 TUBB4BP68371 445 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 ZSCAN26Q16670 478 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 CATSPER3Q86XQ3 398 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 TXLNBQ8N3L3 684 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
CNOT3-201ENST00000221232 TSGA10Q9BZW7 698 aa16.15■□□□□ 0.18
CNOT3-201ENST00000221232 RSPH10B2B2RC85 870 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 RSPH10BP0C881 870 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 UBXN2AP68543 259 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 PSMD2Q13200 908 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 ORC2Q13416 577 aaPredicted RBP16.14■□□□□ 0.17
CNOT3-201ENST00000221232 SFMBT2Q5VUG0 894 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 SH3BP5LQ7L8J4 393 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 SIAH1Q8IUQ4 282 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 PACSIN1Q9BY11 444 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 LRRC27Q9C0I9 530 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 CALCOCO1Q9P1Z2 691 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
CNOT3-201ENST00000221232 F5H6K3 240 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 MEIS2O14770 477 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 JAG1P78504 1218 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 ARHGAP4P98171 946 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 KLRC3Q07444 240 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 COBLL1Q53SF7 1204 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 HGSNATQ68CP4 663 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 TDRD3Q9H7E2 651 aaKnown RBP16.14■□□□□ 0.17
CNOT3-201ENST00000221232 FAM204AQ9H8W3 233 aa16.14■□□□□ 0.17
CNOT3-201ENST00000221232 QTRT2Q9H974 415 aaKnown RBP16.14■□□□□ 0.17
CNOT3-201ENST00000221232 CDK17Q00537 523 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 ICA1Q05084 483 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 ZCWPW2Q504Y3 356 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 TCERG1LQ5VWI1 586 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 CCNI2Q6ZMN8 369 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-201ENST00000221232 SPATA4Q8NEY3 305 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 GOLPH3Q9H4A6 298 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 RGL1Q9NZL6 768 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 FAM86B1E9PN63 330 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 CLIC2O15247 247 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 RNF40O75150 1001 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 MMP10P09238 476 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 FAM86B2P0C5J1 330 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms