RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 RSRC2Q7L4I2 434 aaKnown RBP11.58□□□□□ -0.56
VPS18-201ENST00000220509 SRBD1Q8N5C6 995 aaKnown RBP11.58□□□□□ -0.56
VPS18-201ENST00000220509 FAM81BQ96LP2 452 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 CAPS2Q9BXY5 557 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 HOMER2Q9NSB8 354 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.58□□□□□ -0.56
VPS18-201ENST00000220509 TACC1O75410 805 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 TRAPPC10P48553 1259 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 GRIN1Q05586 938 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 COL14A1Q05707 1796 aaKnown RBP11.58□□□□□ -0.56
VPS18-201ENST00000220509 DDR1Q08345 913 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 PRR16Q569H4 304 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 SLFN13Q68D06 897 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 KIFC2Q96AC6 838 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 RAD17O75943 681 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 ACTN3Q08043 901 aaPredicted RBP11.58□□□□□ -0.56
VPS18-201ENST00000220509 TTLL12Q14166 644 aaPredicted RBP11.58□□□□□ -0.56
VPS18-201ENST00000220509 DLGAP5Q15398 846 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 TMTC1Q8IUR5 882 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 L1RE1Q9UN81 338 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 SCAF8Q9UPN6 1271 aaKnown RBP11.58□□□□□ -0.56
VPS18-201ENST00000220509 GDAQ9Y2T3 454 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 GJA3Q9Y6H8 435 aa11.58□□□□□ -0.56
VPS18-201ENST00000220509 GOLGA6L7A0A1B0GV03 622 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 BAG6P46379 1132 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 C2orf54Q08AI8 447 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 STXBP4Q6ZWJ1 553 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 FBXO33Q7Z6M2 555 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 TBC1D16Q8TBP0 767 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 ARHGEF10LQ9HCE6 1279 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 POLLQ9UGP5 575 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 XIRP1Q702N8 1843 aaKnown RBP11.57□□□□□ -0.56
VPS18-201ENST00000220509 GOLGA6L10A6NI86 522 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 PP2D1A8MPX8 630 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 ERCC5P28715 1186 aaPredicted RBP11.57□□□□□ -0.56
VPS18-201ENST00000220509 SCNN1BP51168 640 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 CYP4A11Q02928 519 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 CETN1Q12798 172 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 GRIK5Q16478 980 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 UBE2SQ16763 222 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 HS2ST1Q7LGA3 356 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 ANKRD13CQ8N6S4 541 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 ENOX1Q8TC92 643 aaKnown RBP11.57□□□□□ -0.56
VPS18-201ENST00000220509 CEP95Q96GE4 821 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 ZBED6P86452 979 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 MPP3Q13368 585 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 SLC5A9Q2M3M2 681 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 OLFML1Q6UWY5 402 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 FOXP4Q8IVH2 680 aaPredicted RBP11.57□□□□□ -0.56
VPS18-201ENST00000220509 CTNNBL1Q8WYA6 563 aaPredicted RBP11.57□□□□□ -0.56
VPS18-201ENST00000220509 SPATA7Q9P0W8 599 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 SAR1BQ9Y6B6 198 aa11.57□□□□□ -0.56
VPS18-201ENST00000220509 SLIT2O94813 1529 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 HSF2BPO75031 334 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 RPSAP08865 295 aaKnown RBP11.56□□□□□ -0.56
VPS18-201ENST00000220509 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
VPS18-201ENST00000220509 PTPROQ16827 1216 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 PFKFB3Q16875 520 aaPredicted RBP11.56□□□□□ -0.56
VPS18-201ENST00000220509 SLC10A5Q5PT55 438 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 CLEC10AQ8IUN9 316 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 INTS13Q9NVM9 706 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 USP17L5A8MUK1 530 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 MYO1FO00160 1098 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 KRT38O76015 456 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 TTLL1O95922 423 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 MAGEA10P43363 369 aaPredicted RBP11.56□□□□□ -0.56
VPS18-201ENST00000220509 COPB1P53618 953 aaKnown RBP11.56□□□□□ -0.56
VPS18-201ENST00000220509 CYP27A1Q02318 531 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 IRF5Q13568 498 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 CUL4BQ13620 913 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 LRRC41Q15345 812 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 HAUS3Q68CZ6 603 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 OR8K1Q8NGG5 319 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 PPANQ9NQ55 473 aaKnown RBP11.56□□□□□ -0.56
VPS18-201ENST00000220509 DDX25Q9UHL0 483 aaKnown RBP11.56□□□□□ -0.56
VPS18-201ENST00000220509 TCRBV5S4A2TA0A5A2 114 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 H7C1D1 291 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 ZNF185O15231 689 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 FXR1P51114 621 aaKnown RBP eCLIP11.56□□□□□ -0.56
VPS18-201ENST00000220509 GUCY2FP51841 1108 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 SNAP25P60880 206 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 TRIM14Q14142 442 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 ZNF394Q53GI3 561 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 GALNT17Q6IS24 598 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 RBM12BQ8IXT5 1001 aaKnown RBP11.56□□□□□ -0.56
VPS18-201ENST00000220509 SH2D3CQ8N5H7 860 aa11.56□□□□□ -0.56
VPS18-201ENST00000220509 CETN3O15182 167 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 PLCG1P19174 1290 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 RRAGAQ7L523 313 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 PARP9Q8IXQ6 854 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 WHAMMQ8TF30 809 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 JAKMIP2Q96AA8 810 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 IL17RAQ96F46 866 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.55□□□□□ -0.56
VPS18-201ENST00000220509 DNM3Q9UQ16 869 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 BACH1O14867 736 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 ZNF24P17028 368 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 PRKG1Q13976 671 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 AOC3Q16853 763 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms