RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 ING1Q9UK53 422 aaPredicted RBP4.66□□□□□ -1.66
CDKN3-201ENST00000216414 TADA3O75528 432 aa4.65□□□□□ -1.67
CDKN3-201ENST00000216414 EMC4Q5J8M3 183 aa4.65□□□□□ -1.67
CDKN3-201ENST00000216414 RALYLQ86SE5 291 aaKnown RBP4.65□□□□□ -1.67
CDKN3-201ENST00000216414 KREMEN2Q8NCW0 462 aa4.65□□□□□ -1.67
CDKN3-201ENST00000216414 NUDT10Q8NFP7 164 aa4.65□□□□□ -1.67
CDKN3-201ENST00000216414 NUDT11Q96G61 164 aa4.65□□□□□ -1.67
CDKN3-201ENST00000216414 EPB41L1Q9H4G0 881 aa4.65□□□□□ -1.67
CDKN3-201ENST00000216414 WASF3Q9UPY6 502 aa4.65□□□□□ -1.67
CDKN3-201ENST00000216414 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.65□□□□□ -1.67
CDKN3-201ENST00000216414 RECKO95980 971 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 CPP00450 1065 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 ITGAVP06756 1048 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 LTBRP36941 435 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 GJA8P48165 433 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 SF1Q15637 639 aaKnown RBP4.64□□□□□ -1.67
CDKN3-201ENST00000216414 HS1BP3Q53T59 392 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 ACBD5Q5T8D3 534 aaPredicted RBP4.64□□□□□ -1.67
CDKN3-201ENST00000216414 VASNQ6EMK4 673 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 ZNF227Q86WZ6 799 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.64□□□□□ -1.67
CDKN3-201ENST00000216414 GNRHR2Q96P88 292 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 ADAM29Q9UKF5 820 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 TESMINQ9Y4I5 508 aa4.64□□□□□ -1.67
CDKN3-201ENST00000216414 PCSK5Q92824 1860 aa4.63□□□□□ -1.67
CDKN3-201ENST00000216414 MAFKO60675 156 aa4.63□□□□□ -1.67
CDKN3-201ENST00000216414 CNOT4O95628 575 aaKnown RBP4.63□□□□□ -1.67
CDKN3-201ENST00000216414 SCG5P05408 212 aa4.63□□□□□ -1.67
CDKN3-201ENST00000216414 GRIN1Q05586 938 aa4.63□□□□□ -1.67
CDKN3-201ENST00000216414 C6orf15Q6UXA7 325 aaPredicted RBP4.63□□□□□ -1.67
CDKN3-201ENST00000216414 GPR155Q7Z3F1 870 aa4.63□□□□□ -1.67
CDKN3-201ENST00000216414 METTL16Q86W50 562 aaKnown RBP4.63□□□□□ -1.67
CDKN3-201ENST00000216414 PHOSPHO1Q8TCT1 267 aa4.63□□□□□ -1.67
CDKN3-201ENST00000216414 LRRC37BQ96QE4 947 aa4.63□□□□□ -1.67
CDKN3-201ENST00000216414 SMOC1Q9H4F8 434 aa4.63□□□□□ -1.67
CDKN3-201ENST00000216414 NPIPB8E9PQR5 432 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 KRIT1O00522 736 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 SLC27A2O14975 620 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 KLHL18O94889 574 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 FBXO21O94952 628 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 COL6A1P12109 1028 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 FHL2Q14192 279 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 PRKD1Q15139 912 aaPredicted RBP4.62□□□□□ -1.67
CDKN3-201ENST00000216414 SMAD2Q15796 467 aaKnown RBP4.62□□□□□ -1.67
CDKN3-201ENST00000216414 SMN1Q16637 294 aaKnown RBP4.62□□□□□ -1.67
CDKN3-201ENST00000216414 LARP1BQ659C4 914 aaKnown RBP4.62□□□□□ -1.67
CDKN3-201ENST00000216414 NT5DC4Q86YG4 428 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 GIMAP8Q8ND71 665 aaPredicted RBP4.62□□□□□ -1.67
CDKN3-201ENST00000216414 SEC16BQ96JE7 1060 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 CCDC140Q96MF4 163 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 LMF1Q96S06 567 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 ADOQ96SZ5 270 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 DLL4Q9NR61 685 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 ASH2LQ9UBL3 628 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 STRIP2Q9ULQ0 834 aa4.62□□□□□ -1.67
CDKN3-201ENST00000216414 B2RBV5 119 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 FOXS1O43638 330 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 TGM1P22735 817 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 GFRA1P56159 465 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 FOXE3Q13461 319 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 NRN1LQ496H8 165 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 Q6ZUG5 572 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 PROSER1Q86XN7 944 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 TRIM48Q8IWZ4 208 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 FAM178BQ8IXR5 827 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 IFNL2Q8IZJ0 200 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 DTX3Q8N9I9 347 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 TMEM145Q8NBT3 493 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 PIP4K2CQ8TBX8 421 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 CSRNP2Q9H175 543 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 SEC61A2Q9H9S3 476 aa4.61□□□□□ -1.67
CDKN3-201ENST00000216414 ZFR2Q9UPR6 939 aaKnown RBP4.61□□□□□ -1.67
CDKN3-201ENST00000216414 SUSD5O60279 629 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 GLRBP48167 497 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 INHBEP58166 350 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 PURAQ00577 322 aaKnown RBP4.6□□□□□ -1.67
CDKN3-201ENST00000216414 TESK1Q15569 626 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 DENND5AQ6IQ26 1287 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 TCTN3Q6NUS6 607 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 JAM3Q9BX67 310 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 ACTR10Q9NZ32 417 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 ZFP69BQ9UJL9 534 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 SLC4A7Q9Y6M7 1214 aa4.6□□□□□ -1.67
CDKN3-201ENST00000216414 SMAD7O15105 426 aaKnown RBP4.59□□□□□ -1.67
CDKN3-201ENST00000216414 DDAH1O94760 285 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 KNG1P01042 644 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 CKMP06732 381 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 CSF2RBP32927 897 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 HDLBPQ00341 1268 aaKnown RBP4.59□□□□□ -1.67
CDKN3-201ENST00000216414 SKIDA1Q1XH10 827 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 ZNF568Q3ZCX4 644 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 USP39Q53GS9 565 aaKnown RBP4.59□□□□□ -1.67
CDKN3-201ENST00000216414 TMCO4Q5TGY1 634 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 CYP4F22Q6NT55 531 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 RNF207Q6ZRF8 634 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 TAX1BP1Q86VP1 789 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 RBM12BQ8IXT5 1001 aaKnown RBP4.59□□□□□ -1.67
CDKN3-201ENST00000216414 STPG3Q8N7X2 389 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 TTLL11Q8NHH1 800 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 CLEC4DQ8WXI8 215 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms