RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 CCDC26Q8TAB7 109 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 ZNF622Q969S3 477 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■□□□□ 10.2
ACTN1-201ENST00000193403 ZNF512BQ96KM6 892 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-201ENST00000193403 LAMA4Q16363 1823 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 CETN3O15182 167 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 SCP2P22307 547 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 ZKSCAN8Q15776 578 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-201ENST00000193403 MEA1Q16626 185 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 KLHDC7AQ5VTJ3 777 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 KCNV1Q6PIU1 500 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 WHAMMQ8TF30 809 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 RPGRQ92834 1020 aaKnown RBP12.25□□□□□ -0.45
ACTN1-201ENST00000193403 YY1AP1Q9H869 796 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 COL4A3BPQ9Y5P4 624 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 UTRNP46939 3433 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 MED1Q15648 1581 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-201ENST00000193403 A0A087X0T9 212 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 BAG3O95817 575 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 FAM228BP0C875 321 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 GPBP1Q86WP2 473 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 SUGP1Q8IWZ8 645 aaKnown RBP12.25□□□□□ -0.45
ACTN1-201ENST00000193403 KIAA0895Q8NCT3 520 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 CTNNBL1Q8WYA6 563 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-201ENST00000193403 ARPP21Q9UBL0 812 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-201ENST00000193403 A0A1B0GUA9 196 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 FGFR2P21802 821 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 RCAN1P53805 252 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 ZNF211Q13398 564 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 SPATS2Q86XZ4 545 aaKnown RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 MSL3Q8N5Y2 521 aaKnown RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 GRIN2DO15399 1336 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 GOLGA6L10A0A0M3HER8 536 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 KLRC4O43908 158 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 SERPING1P05155 500 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 CYP19A1P11511 503 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 PPP1R2P41236 205 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 FKBP3Q00688 224 aaKnown RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 FUT2Q10981 343 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 ARHGAP44Q17R89 818 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 TBC1D10BQ4KMP7 808 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 OTUD6AQ7L8S5 288 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 SEPT12Q8IYM1 358 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 MICAL1Q8TDZ2 1067 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 TRIM51Q9BSJ1 452 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 MYH10P35580 1976 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 NPHP3-ACAD11A0A0J9YXS1 232 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 SPDYE3A6NKU9 549 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 PGRMC1O00264 195 aaKnown RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 MEIS1O00470 390 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 SART1O43290 800 aaKnown RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 CCDC38Q502W7 563 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 CCDC65Q8IXS2 484 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 RDH13Q8NBN7 331 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 RSRC1Q96IZ7 334 aaKnown RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 ERGIC2Q96RQ1 377 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 EYA3Q99504 573 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 ELAC2Q9BQ52 826 aaKnown RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 DNAJC17Q9NVM6 304 aaKnown RBP12.24□□□□□ -0.45
ACTN1-201ENST00000193403 KBTBD4Q9NVX7 518 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
ACTN1-201ENST00000193403 TTI1O43156 1089 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 SKAP2O75563 359 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-201ENST00000193403 NR2F2P24468 414 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 RFC4P35249 363 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 HSD17B3P37058 310 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 TCP10Q12799 353 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 ERFEQ4G0M1 354 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 MIIPQ5JXC2 388 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 PARP9Q8IXQ6 854 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 HVCN1Q96D96 273 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 THOC1Q96FV9 657 aaKnown RBP12.23□□□□□ -0.45
ACTN1-201ENST00000193403 CCSER1Q9C0I3 900 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 CLIC2O15247 247 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 RGS16O15492 202 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-201ENST00000193403 CHMP2AO43633 222 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 KIF4AO95239 1232 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 MYO1EQ12965 1108 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 NPY5RQ15761 445 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 ALKBH5Q6P6C2 394 aaKnown RBP12.23□□□□□ -0.45
ACTN1-201ENST00000193403 TEX11Q8IYF3 940 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 CCDC63Q8NA47 563 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 CELF1Q92879 486 aaKnown RBP12.23□□□□□ -0.45
ACTN1-201ENST00000193403 RIOK1Q9BRS2 568 aaKnown RBP12.23□□□□□ -0.45
ACTN1-201ENST00000193403 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 PNMA2Q9UL42 364 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
ACTN1-201ENST00000193403 GSTTP1A0A1W2PQM5 241 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 E9PMD0 336 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 OPLAHO14841 1288 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 FGGP02679 453 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 KDM7AQ6ZMT4 941 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 MRRFQ96E11 262 aaKnown RBP12.23□□□□□ -0.45
ACTN1-201ENST00000193403 TMEM47Q9BQJ4 181 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 PTPN22Q9Y2R2 807 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 SNX24Q9Y343 169 aa12.23□□□□□ -0.45
ACTN1-201ENST00000193403 NOC2LQ9Y3T9 749 aaKnown RBP12.23□□□□□ -0.45
ACTN1-201ENST00000193403 FLOT1O75955 427 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms