RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 SLC40A1Q9NP59 571 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 ODF2LQ9ULJ1 636 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 E9PMD0 336 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 CCDC38Q502W7 563 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 HIBCHQ6NVY1 386 aaPredicted RBP18.39■□□□□ 0.53
CTDP1-201ENST00000075430 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
CTDP1-201ENST00000075430 NEK8Q86SG6 692 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 BAZ2AQ9UIF9 1905 aaKnown RBP18.38■□□□□ 0.53
CTDP1-201ENST00000075430 SLC16A2P36021 539 aa18.38■□□□□ 0.53
CTDP1-201ENST00000075430 ERVK-9P63128 1117 aa18.38■□□□□ 0.53
CTDP1-201ENST00000075430 CCDC84Q86UT8 332 aaPredicted RBP18.38■□□□□ 0.53
CTDP1-201ENST00000075430 RETREG2Q8NC44 543 aa18.38■□□□□ 0.53
CTDP1-201ENST00000075430 BANK1Q8NDB2 785 aa18.38■□□□□ 0.53
CTDP1-201ENST00000075430 SH3RF3Q8TEJ3 882 aaPredicted RBP18.38■□□□□ 0.53
CTDP1-201ENST00000075430 CYFIP2Q96F07 1278 aa18.38■□□□□ 0.53
CTDP1-201ENST00000075430 TMEM47Q9BQJ4 181 aa18.38■□□□□ 0.53
CTDP1-201ENST00000075430 ALS2Q96Q42 1657 aa18.38■□□□□ 0.53
CTDP1-201ENST00000075430 GBP2P32456 591 aaPredicted RBP18.38■□□□□ 0.53
CTDP1-201ENST00000075430 RFC4P35249 363 aa18.38■□□□□ 0.53
CTDP1-201ENST00000075430 TPTE2Q6XPS3 522 aa18.38■□□□□ 0.53
CTDP1-201ENST00000075430 NSUN4Q96CB9 384 aaKnown RBP18.38■□□□□ 0.53
CTDP1-201ENST00000075430 GEMIN8Q9NWZ8 242 aaKnown RBP18.38■□□□□ 0.53
CTDP1-201ENST00000075430 SLC37A4O43826 429 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 VIMP08670 466 aaKnown RBP18.37■□□□□ 0.53
CTDP1-201ENST00000075430 HSD17B3P37058 310 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 TNNC1P63316 161 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 KCNB1Q14721 858 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 KRT79Q5XKE5 535 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 SLC30A10Q6XR72 485 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 NEUROG2Q9H2A3 272 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 TTI1O43156 1089 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
CTDP1-201ENST00000075430 KRT13P13646 458 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 SLC9A1P19634 815 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 PDXDC1Q6P996 788 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 DNAJC17Q9NVM6 304 aaKnown RBP18.37■□□□□ 0.53
CTDP1-201ENST00000075430 SUFUQ9UMX1 484 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 USP54Q70EL1 1684 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 C6orf229H3BNL8 230 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 TLR2O60603 784 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 UBE4AQ14139 1066 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 THOC1Q96FV9 657 aaKnown RBP18.37■□□□□ 0.53
CTDP1-201ENST00000075430 ERGIC2Q96RQ1 377 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 C6orf50Q9HD87 102 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 SIK3Q9Y2K2 1263 aa18.37■□□□□ 0.53
CTDP1-201ENST00000075430 SIPA1L3O60292 1781 aaPredicted RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 SFI1A8K8P3 1242 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 CLIC2O15247 247 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 SART1O43290 800 aaKnown RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 LDHBP07195 334 aaKnown RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 CLNS1AP54105 237 aaKnown RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 PLS1Q14651 629 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 ASIC2Q16515 512 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 REXO1Q8N1G1 1221 aaKnown RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 MSL3Q8N5Y2 521 aaKnown RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 CCNL1Q9UK58 526 aaPredicted RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 RIMBP2O15034 1052 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 KCNMA1Q12791 1236 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 TBC1D1Q86TI0 1168 aaPredicted RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 IQCKQ8N0W5 287 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 RDH13Q8NBN7 331 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 U2AF1L4Q8WU68 220 aaKnown RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 IKZF4Q9H2S9 585 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 CTNND1O60716 968 aaKnown RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 GRIK5Q16478 980 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 PEX26Q7Z412 305 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 MYOCDQ8IZQ8 938 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 ZKSCAN4Q969J2 545 aaPredicted RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 LBHD1Q9BQE6 289 aaPredicted RBP18.36■□□□□ 0.53
CTDP1-201ENST00000075430 KIAA1024Q9UPX6 916 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 PCDHB13Q9Y5F0 798 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 TNS2Q63HR2 1409 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 ADAMTSL3P82987 1691 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 AKAP11Q9UKA4 1901 aa18.36■□□□□ 0.53
CTDP1-201ENST00000075430 NEBLO76041 1014 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 TMEM266Q2M3C6 531 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 OTUD6AQ7L8S5 288 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 SUGP1Q8IWZ8 645 aaKnown RBP18.35■□□□□ 0.53
CTDP1-201ENST00000075430 CEP89Q96ST8 783 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 BCAS3Q9H6U6 928 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 LUC7LQ9NQ29 371 aaKnown RBP18.35■□□□□ 0.53
CTDP1-201ENST00000075430 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
CTDP1-201ENST00000075430 CNOT8Q9UFF9 292 aaKnown RBP18.35■□□□□ 0.53
CTDP1-201ENST00000075430 PNMA2Q9UL42 364 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 RTCBQ9Y3I0 505 aaKnown RBP18.35■□□□□ 0.53
CTDP1-201ENST00000075430 G3V3G9 751 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 STXBP3O00186 592 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 LRRC14Q15048 493 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 MSL1Q68DK7 614 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 PLCD4Q9BRC7 762 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 CCSER1Q9C0I3 900 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 BSDC1Q9NW68 430 aaPredicted RBP18.35■□□□□ 0.53
CTDP1-201ENST00000075430 MAD2L2Q9UI95 211 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 ZNF804BA4D1E1 1349 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 DNM1LO00429 736 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 STAT3P40763 770 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 PEX19P40855 299 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 ADAM9Q13443 819 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms