RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Gcnt1Q09324 428 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tmed8Q3UHI4 326 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Klhl20Q8VCK5 604 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Krt79Q8VED5 531 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 AacsQ9D2R0 672 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Capn9Q9D805 690 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ambra1A2AH22 1300 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Armc3A2AU72 881 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 P4hbP09103 509 aaKnown RBP12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Rpusd2Q149F1 553 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Rnf207Q3V3A7 635 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ddx49Q4FZF3 480 aaKnown RBP12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gas8Q60779 478 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Naa15Q80UM3 865 aaKnown RBP12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Mxd3Q80US8 206 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Olfr805Q8VFI4 319 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Dnajc19Q9CQV7 116 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Saal1Q9D2C2 474 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Dydc1Q9D9T0 175 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Prpf4Q9DAW6 521 aaKnown RBP12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Fxr2Q9WVR4 673 aaKnown RBP12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Nr1i3O35627 358 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gap43P06837 227 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gga2Q6P5E6 603 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Znf18Q810A1 556 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ythdf3Q8BYK6 585 aaKnown RBP12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 TbcbQ9D1E6 244 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ttc13A0A1L1SSC7 844 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 D1Pas1P16381 660 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Asap3Q5U464 904 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tsg101Q61187 391 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Pacsin1Q61644 441 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tsga10Q6NY15 697 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Rhbdf1Q6PIX5 856 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Zic5Q7TQ40 622 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Pramel6Q810Y9 485 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Cog5Q8C0L8 829 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Prpf40aQ9R1C7 953 aaKnown RBP12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Trim10Q9WUH5 489 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Fgd3O88842 733 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tnnc1P19123 161 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ctnnd1P30999 938 aaKnown RBP12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Hspa9P38647 679 aaKnown RBP12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Hdgfl1Q2VPR5 283 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Serpinb6Q60854 378 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Grm4Q68EF4 912 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 NfrkbQ6PIJ4 1296 aaKnown RBP12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Usp38Q8BW70 1042 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Mettl5Q8K1A0 209 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Dusp19Q8K4T5 220 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Hps4Q99KG7 671 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 NagaQ9QWR8 415 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Adgrf5G5E8Q8 1348 aa12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Togaram1Q6A070 1776 aaKnown RBP12.41□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ccdc6D3YZP9 469 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 ChkbO55229 394 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Alppl2P24823 529 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Arhgap44Q5SSM3 814 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Fbxw10Q5SUS0 1030 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Wdr44Q6NVE8 915 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ublcp1Q8BGR9 318 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Rab11fip4Q8BQP8 635 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Psmd2Q8VDM4 908 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Luc7lQ9CYI4 371 aaKnown RBP12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Kiaa1522A2A7S8 1013 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Lmnb2P21619 596 aaKnown RBP12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Pnma5Q5DTT8 618 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gm5169Q5M8P2 212 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Trpc6Q61143 930 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 EsrrbQ61539 433 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Iws1Q8C1D8 766 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Vps37cQ8R105 352 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 ParnQ8VDG3 624 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Dhx58Q99J87 678 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Mxra8Q9DBV4 442 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Myoz2Q9JJW5 264 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Becn2P0DM65 447 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Fam107bQ3TGF2 131 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 GartQ64737 1010 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Atp2b4Q6Q477 1205 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Klhl7Q8BUL5 586 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 OplahQ8K010 1288 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Bbs7Q8K2G4 715 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Creb3l3Q91XE9 479 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 PccaQ91ZA3 724 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Atp6v0a4Q920R6 833 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Mzb1Q9D8I1 188 aa12.4□□□□□ -0.42
Lig1-211ENSMUST00000177588 Usp4P35123 962 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 PltpP55065 493 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 HibadhQ99L13 335 aaKnown RBP12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ltbp2O08999 1813 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 Lrrc32G3XA59 663 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 ProcP33587 460 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 Myo1fP70248 1099 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 Pkn1P70268 946 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 Nhej1Q3KNJ2 295 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 Bbs9Q811G0 885 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 AarsQ8BGQ7 968 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 Lgi2Q8K4Z0 550 aa12.39□□□□□ -0.43
Lig1-211ENSMUST00000177588 Gps2Q921N8 327 aa12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms