RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Celf1P28659 486 aaKnown RBP13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ccdc84Q4VA36 332 aaKnown RBP13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Brd2Q7JJ13 798 aaKnown RBP13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 AmphQ7TQF7 686 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Osbpl2Q8BX94 484 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Vmn1r191Q8K4D0 298 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Prpsap1Q9D0M1 356 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rnf6Q9DBU5 667 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Dach1Q9QYB2 751 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Gfpt2Q9Z2Z9 682 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Eef1bO70251 225 aaKnown RBP13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Aoc3O70423 765 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Tmtc1Q3UV71 942 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Fxr1Q61584 677 aaKnown RBP13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rbbp5Q8BX09 538 aaKnown RBP13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Apbb1ipQ8R5A3 670 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ggps1Q9WTN0 300 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Hecw1Q8K4P8 1604 aa13.11□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Per2O54943 1257 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Gdap1O88741 358 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ppp1r12cQ3UMT1 782 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Cnot10Q8BH15 744 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Slc26a6Q8CIW6 758 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Afg3l2Q8JZQ2 802 aaKnown RBP13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Creb3l3Q91XE9 479 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Med15Q924H2 789 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Spc24Q9D083 201 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ndst4Q9EQW8 872 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rcan1Q9JHG6 198 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Slc12a7Q9WVL3 1083 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Arhgap33Q80YF9 1305 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Kcng1A2BDX4 514 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 StamP70297 548 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 GypcQ78HU7 95 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 EngaseQ8BX80 734 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Lrrc8cQ8R502 803 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ccdc65Q8VHI7 493 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Pde6cQ91ZQ1 861 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Gadd45gQ9Z111 159 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Brpf3B2KF05 1204 aaKnown RBP13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Gnrh1P13562 90 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ms4a2P20490 235 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Kpna2P52293 529 aaKnown RBP13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Slc9a1Q61165 820 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Igsf3Q6ZQA6 1194 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Impg2Q80XH2 1243 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Tbc1d19Q8VDV7 526 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 BlvraQ9CY64 295 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Tmem47Q9JJG6 181 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Krt36B1AQ75 473 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Nyap1Q6PFX7 833 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Skida1Q80YR3 822 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 CcnyQ8BGU5 341 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Klhl38Q8BSF5 581 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Gbp9Q8BTS3 619 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Gbp5Q8CFB4 590 aa13.1□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Kcnh4A2A5F7 1018 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Pfkfb3A7UAK5 555 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Tbc1d30Q69ZT9 766 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Cep70Q6IQY5 616 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Tbc1d22bQ80VE5 505 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ankrd24Q80VM7 985 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Lig4Q8BTF7 911 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Trim66Q924W6 1242 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Telo2Q9DC40 840 aaKnown RBP13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Pidd1Q9ERV7 915 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Abca6Q8K441 1624 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Carmil3Q3UFQ8 1375 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Abcb5B5X0E4 1255 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Grem2O88273 168 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Actn1Q7TPR4 892 aaKnown RBP13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Add3Q9QYB5 706 aaKnown RBP13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Pabpc1lA2A5N3 607 aaKnown RBP13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Cyp2c68K7N6C2 491 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Gpc4P51655 557 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Surf6P70279 355 aaKnown RBP13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Evi5P97366 809 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Snx14Q8BHY8 964 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rnaseh2aQ9CWY8 301 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Serpina9Q9D7D2 418 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Supt20hQ7TT00 530 aaKnown RBP13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rab11fip4Q8BQP8 635 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Dnm3Q8BZ98 863 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Svs3bQ8BZH8 265 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Nek9Q8K1R7 984 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Eif4a3Q91VC3 411 aaKnown RBP13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Sf3a3Q9D554 501 aaKnown RBP13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rbp7Q9EPC5 134 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Kcnq5Q9JK45 933 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Hic2Q9JLZ6 619 aaKnown RBP13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Sucla2Q9Z2I9 463 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Krt27Q9Z320 448 aa13.09□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Apol6B7ZC55 329 aa13.08□□□□□ -0.32
Col8a1-201ENSMUST00000089332 Serpina3iD3Z450 408 aa13.08□□□□□ -0.32
Col8a1-201ENSMUST00000089332 Taf1bP97358 586 aa13.08□□□□□ -0.32
Col8a1-201ENSMUST00000089332 Frmd8Q3UFK8 466 aa13.08□□□□□ -0.32
Col8a1-201ENSMUST00000089332 Fra10ac1Q8BP78 315 aa13.08□□□□□ -0.32
Col8a1-201ENSMUST00000089332 Prpf6Q91YR7 941 aaKnown RBP13.08□□□□□ -0.32
Col8a1-201ENSMUST00000089332 HnrnpcQ9Z204 313 aaKnown RBP13.08□□□□□ -0.32
Col8a1-201ENSMUST00000089332 Nlrp1bA1Z198 1177 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms