RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 GartQ64737 1010 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Dhx37Q6NZL1 1150 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Herc4Q6PAV2 1057 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Bola2Q8BGS2 86 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Haus1Q8BHX1 278 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Cdan1Q8CC12 1239 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Pak2Q8CIN4 524 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Vwa5aQ99KC8 793 aaKnown RBP12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Klc4Q9DBS5 619 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Slfn1Q9Z0I7 337 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Cfap44E9Q5M6 1843 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Clcn6O35454 870 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Setd4P58467 439 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Lilrb3P97484 841 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tmprss11aQ3UQ41 389 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ddx49Q4FZF3 480 aaKnown RBP12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Krt87Q6IMF0 495 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Lsm14bQ8CGC4 385 aaKnown RBP12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Msantd4Q91YU3 345 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Krt34Q9D646 392 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Slc12a7Q9WVL3 1083 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 IkQ9Z1M8 557 aaKnown RBP12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Zfyve9A2A8R0 1397 aa12.71□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ttc13A0A1L1SSC7 844 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Zscan18E9PUD6 809 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gdap1O88741 358 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gap43P06837 227 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Atp6v1aP50516 617 aaKnown RBP12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Fam178bQ24JP3 464 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Acsbg2Q2XU92 667 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Tspyl3Q3UYP3 334 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Kiaa0319Q5SZV5 1081 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Glra4Q61603 456 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ccpg1Q640L3 753 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 SugctQ7TNE1 436 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Bbs7Q8K2G4 715 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 TbcbQ9D1E6 244 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Arl2bpQ9D385 163 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Adgrf5G5E8Q8 1348 aa12.71□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Lbhd1A0A087WPA0 259 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ctnnd1P30999 938 aaKnown RBP12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gjb6P70689 261 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Fbln1Q08879 705 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Esyt2Q3TZZ7 845 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Trip13Q3UA06 432 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Tmed8Q3UHI4 326 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Grm4Q68EF4 912 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 PccaQ91ZA3 724 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Cdca7Q9D0M2 382 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ebag9Q9D0V7 213 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Slc40a1Q9JHI9 570 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 PappaQ8R4K8 1624 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Btbd18A0A0A6YY25 723 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Dnai2A2AC93 623 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Stat4P42228 749 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Opa1P58281 960 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Dcaf17Q3TUL7 519 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Naa15Q80UM3 865 aaKnown RBP12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Eif3hQ91WK2 352 aaKnown RBP12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Smc6Q924W5 1097 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 LrmdaQ9D9B4 229 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gkap1Q9JMB0 366 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Nup98Q6PFD9 1816 aaKnown RBP12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 1700016G14RikA0A286YCZ6 238 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Mroh9G5E8L9 891 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Hnrnph1O35737 449 aaKnown RBP12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Stat3P42227 770 aaKnown RBP12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Vps33bP59016 617 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Hnrnph2P70333 449 aaKnown RBP12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Rapgef1Q3UHC1 1224 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Naa35Q6PHQ8 725 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Usp17leQ7M764 540 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 RalylQ8BTF8 293 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Als2cr12Q8BVM7 383 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 BbxQ8VBW5 907 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Dnajc19Q9CQV7 116 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Galnt15Q9D2N8 638 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Q9D5Q8 446 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Capn15Q9JLG8 1095 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 GgcxQ9QYC7 757 aa12.7□□□□□ -0.38
Col9a1-202ENSMUST00000088349 GalcP54818 684 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 AdkP55264 361 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Rasa2P58069 847 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Lig3P97386 1015 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Fhdc1Q3ULZ2 1149 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Trpc6Q61143 930 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Olfr832Q7TRG9 312 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Cplx4Q80WM3 160 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ddx10Q80Y44 875 aaKnown RBP12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Thap3Q8BJ25 218 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ddx19bQ8BZY3 494 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Cog5Q8C0L8 829 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Dennd2aQ8C4S8 1000 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Kbtbd4Q8R179 534 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 TxlnbQ8VBT1 685 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Lzts2Q91YU6 671 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Akap8Q9DBR0 687 aaKnown RBP12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Zfp174B9EJW5 407 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gm1758F6VZZ1 202 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Krt18P05784 423 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms