RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 MymkQ9D1N4 221 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Uchl5Q9WUP7 329 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Bpifb4A2BGH0 617 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Zfp213E9QAW0 468 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Igfbp4P47879 254 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 CebpzP53569 1052 aaKnown RBP9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Rasa2P58069 847 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Bach2P97303 839 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Acot10Q32MW3 439 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ece1Q4PZA2 769 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Sval3Q76I99 144 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cyp4f39Q8BGU0 532 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Enox1Q8BHR2 643 aaKnown RBP9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Mrgprx1Q8CIP3 322 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Txndc5Q91W90 417 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Haus2Q9CQS9 234 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ears2Q9CXJ1 523 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 RnmtQ9D0L8 465 aaKnown RBP9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Pappa2E9PZ87 1789 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 DohhA0A1Y7VJ29 135 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Klhl34A2AI76 644 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Skor2A7M7C7 1008 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Idh1O88844 414 aaKnown RBP9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Akr1b1P45376 316 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 4933427I04RikQ3V053 235 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Mcm7Q61881 719 aaKnown RBP9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Gpd2Q64521 727 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cyp26b1Q811W2 512 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Anks1bQ8BIZ1 1259 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ppp1r3gQ9CW07 347 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Mis18aQ9CZJ6 204 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Mss51Q9D5Z5 446 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Tacc2Q9JJG0 1149 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ttc6G3UYY4 1857 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 1700018F24RikB2RW27 314 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 SfnO70456 248 aaKnown RBP9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Zkscan4Q5SZT6 480 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ppp2r5cQ60996 524 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Gba2Q69ZF3 918 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Exoc3Q6KAR6 755 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cyfip1Q7TMB8 1253 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ccdc38Q8CDN8 563 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 PpatQ8CIH9 517 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Nop14Q8R3N1 860 aaKnown RBP9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 Myl7Q9QVP4 175 aa9.68□□□□□ -0.86
Trim39-201ENSMUST00000042717 4932429P05RikA2ADI4 785 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Dhx15O35286 795 aaKnown RBP9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 AurkbO70126 345 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Stra6O70491 670 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 EzrP26040 586 aaKnown RBP9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Nsun7Q14AW5 724 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Krt14Q61781 484 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 OtoaQ8K561 1137 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Mrpl58Q8R035 206 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 SelenooQ9DBC0 667 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 SpibO35906 267 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Slc16a2O70324 545 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 UgcgO88693 394 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Adssl1P28650 457 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Erbb2P70424 1256 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Rit2P70425 217 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Kcnb1Q03717 857 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Pbxip1Q3TVI8 727 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Hvcn1Q3U2S8 269 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Sh2d1b2Q45HK4 132 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Znf652Q5DU09 608 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cfap52Q5F201 620 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Epha7Q61772 998 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Sdccag8Q80UF4 717 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Fam161bQ8CB59 589 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Apol10aQ8CCA5 318 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ano2Q8CFW1 1002 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Rassf3Q99P51 232 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cfap45Q9D9U9 551 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Map3k20Q9ESL4 802 aaKnown RBP9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Nudt5Q9JKX6 218 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Bub1bQ9Z1S0 1052 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Spryd7Q3TFQ1 196 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Rgl2Q61193 778 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Tbc1d22bQ80VE5 505 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 GlmnQ8BZM1 596 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Trim32Q8CH72 655 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Mbtps2Q8CHX6 515 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Tmx1Q8VBT0 278 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Mfap3Q922T2 349 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ctu1Q99J10 420 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Klhl10Q9D5V2 608 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Phtf1Q9QZ09 761 aa9.67□□□□□ -0.86
Trim39-201ENSMUST00000042717 Trpm7Q923J1 1863 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ep400Q8CHI8 3072 aaKnown RBP9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 TazI7HJS2 263 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Rufy4Q3TYX8 563 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Rasip1Q3U0S6 961 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Scarf1Q5ND28 820 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 P4ha1Q60715 534 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Rab11fip4Q8BQP8 635 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Pstpip2Q99M15 334 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Arhgef7Q9ES28 862 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Slc26a4Q9R155 780 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Zfp984A2A7A2 547 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms