RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Cep126Q0VBV7 1103 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tmem109Q3UBX0 243 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Adamts18Q4VC17 1219 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Znf496Q5SXI5 585 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Atp2a3Q64518 1038 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Znf532Q6NXK2 1036 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 PccaQ91ZA3 724 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 EpgnQ924X1 152 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Drc3Q9D5E4 523 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Myoz2Q9JJW5 264 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Slc12a7Q9WVL3 1083 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Eif2ak1Q9Z2R9 619 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Kiaa0232Q80U59 1396 aaKnown RBP11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Adam7O35227 789 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tpp1O89023 562 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ephb4P54761 987 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Nbr1P97432 988 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 GabpaQ00422 454 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Lrriq3Q14DL3 633 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Daam2Q80U19 1115 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Pcdhb12Q91Y07 789 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Strn3Q9ERG2 796 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ppfia4B8QI36 1187 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cfap70D3YVL2 1141 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gm7995L7N2E4 160 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Serpina1aP07758 413 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Serpina1bP22599 413 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Fam207aP58468 219 aaKnown RBP11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 FerP70451 823 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Serpina1cQ00896 412 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Serpina1dQ00897 413 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Slc10a4Q3UEZ8 437 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Sv2cQ69ZS6 727 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Prpf6Q91YR7 941 aaKnown RBP11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Prdm2A2A7B5 1709 aaKnown RBP11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gm11549A0A286YD83 63 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 GpiP06745 558 aaKnown RBP11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ssx2ipQ8VC66 615 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Arl2bpQ9D385 163 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gdap1O88741 358 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Casp14O89094 257 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Rasgrf1P27671 1262 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Esyt2Q3TZZ7 845 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tigd5Q499M4 642 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Vav2Q60992 868 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Xrcc6P23475 608 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cyp11b1Q3TG86 501 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tbc1d22bQ80VE5 505 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Spata21Q8BHW6 681 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 AsphQ8BSY0 741 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Apol7cQ8C6E1 369 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Serpinb13Q8CDC0 389 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Mageb16Q9CWV4 363 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Fam84aQ9D650 292 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Itga2bQ9QUM0 1033 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Acot3Q9QYR7 432 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ankrd2Q9WV06 328 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Map3k15A2AQW0 1331 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Pcdh11xF6ZNL5 1338 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 C87977A2A958 498 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Sh2d4bA6X942 431 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Vmn1r209Q5NC97 312 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Mapk6Q61532 720 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Q80ZQ3 298 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ankrd45Q810N6 248 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 SfnO70456 248 aaKnown RBP11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Dnajc5P60904 198 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Zmym1Q3TJB1 983 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 TchpQ3TVW5 497 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Psmd1Q3TXS7 953 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Islr2Q5RKR3 745 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Usp50Q6P8X6 390 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Znf76Q8BMU0 568 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Morc2bQ8C5W4 1022 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cplx3Q8R1B5 158 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Mst1rQ62190 1378 aa11.16□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gm13023A2A8N2 498 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ttc38A3KMP2 465 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gjb6P70689 261 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Nsun2Q1HFZ0 757 aaKnown RBP11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Psd3Q2PFD7 1037 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ccdc68Q8BVC4 333 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 YarsQ91WQ3 528 aaKnown RBP11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Armc9Q9D2I5 817 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Slc26a4Q9R155 780 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gm7356A0A087WSA6 508 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Serpini1O35684 410 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cd72P21855 354 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Git1Q68FF6 770 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Q8CEZ4 452 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Slc26a6Q8CIW6 758 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Kiaa0391Q8JZY4 584 aaKnown RBP11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Vps37bQ8R0J7 285 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 PdhbQ9D051 359 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ecel1Q9JMI0 775 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Trip6Q9Z1Y4 480 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Arhgap6O54834 987 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Rab20P35295 233 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Trim72Q1XH17 477 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tmem59lQ7TNI2 337 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 91.2 ms