RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Wdr70Q3TWF6 657 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Cacna2d4Q5RJF7 1116 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 EsrrbQ61539 433 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Pip5kl1Q6U7H8 395 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Zic5Q7TQ40 622 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Naa15Q80UM3 865 aaKnown RBP14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Bola2Q8BGS2 86 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 GanQ8CA72 597 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Calcoco1Q8CGU1 691 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Dusp19Q8K4T5 220 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Cdk8Q8R3L8 464 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ginm1Q91WR6 327 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ppp1r3aQ99MR9 1089 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Krt34Q9D646 392 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ccdc89Q9DA73 370 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Adarb2Q9JI20 745 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 PigoQ9JJI6 1093 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Usp14Q9JMA1 493 aaKnown RBP14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 EvplQ9D952 2035 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Hspa9P38647 679 aaKnown RBP14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Atp1b3P97370 278 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gas1Q01721 343 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Lrig2Q52KR2 1054 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Rexo1Q7TT28 1213 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Cplx4Q80WM3 160 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 TxlnbQ8VBT1 685 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Lzts2Q91YU6 671 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Lpin2Q99PI5 893 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Tbx18Q9EPZ6 613 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Klra10Q9R1G6 266 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Kiaa1522A2A7S8 1013 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Wdr72D3YYM4 1114 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Eif6O55135 245 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gcnt1Q09324 428 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Oxr1Q4KMM3 866 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gm5169Q5M8P2 212 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Serpinb6Q60854 378 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Krt87Q6IMF0 495 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 FtoQ8BGW1 502 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Q8BT18 775 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Il17cQ8K4C5 194 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Atp6v0a4Q920R6 833 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Erp44Q9D1Q6 406 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 3830403N18RikQ9D6C3 208 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Trmt112Q9DCG9 125 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 MefvQ9JJ26 767 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Entpd5Q9WUZ9 427 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Arhgap33Q80YF9 1305 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Spocd1B1ASB6 936 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gm7347D3YYI9 267 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Tnnc1P19123 161 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 March6Q6ZQ89 909 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Haus1Q8BHX1 278 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Srp68Q8BMA6 625 aaKnown RBP14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Senp2Q91ZX6 588 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Haus2Q9CQS9 234 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Prpf4Q9DAW6 521 aaKnown RBP14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Sertad2Q9JJG5 309 aa14.74□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gdap1O88741 358 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Becn2P0DM65 447 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Rps6ka1P18653 724 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Usp4P35123 962 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gdf10P97737 476 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Nhej1Q3KNJ2 295 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Nlrp2Q4PLS0 1046 aaKnown RBP14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Cyfip2Q5SQX6 1253 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ccpg1Q640L3 753 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Tmem179Q8BHH9 233 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Als2cr12Q8BVM7 383 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ccnt1Q9QWV9 724 aaKnown RBP14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 EmcnQ9R0H2 261 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Zscan18E9PUD6 809 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ctnna1P26231 906 aaKnown RBP14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ddb1Q3U1J4 1140 aaKnown RBP14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Slc2a13Q3UHK1 637 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Pnma5Q5DTT8 618 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Anks6Q6GQX6 883 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Efcab14Q8BGQ6 484 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Snip1Q8BIZ6 383 aaKnown RBP14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Iws1Q8C1D8 766 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Tbc1d23Q8K0F1 684 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 RnmtQ9D0L8 465 aaKnown RBP14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Capn15Q9JLG8 1095 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Tex21Q9R0U9 575 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 Zfyve9A2A8R0 1397 aa14.73□□□□□ -0.05
Nup88-201ENSMUST00000035283 SlmapQ3URD3 845 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ccdc51Q3URS9 406 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Dhx37Q6NZL1 1150 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Zbtb39Q6PDK0 712 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 PodnQ7TQ62 611 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Olfr832Q7TRG9 312 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 AarsQ8BGQ7 968 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gm28036V9GXJ1 658 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Plch1Q4KWH5 1682 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Arfgef1G3X9K3 1846 aaKnown RBP14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Kcnh2O35219 1162 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 DnttP09838 530 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Lmnb2P21619 596 aaKnown RBP14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Epb41l4aP52963 686 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 AdkP55264 361 aa14.72□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms