RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Rfc4Q99J62 364 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Mtfr1lQ9CWE0 289 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Grin2dQ03391 1323 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gm38392E9Q2A2 434 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Atf2P16951 487 aaKnown RBP10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Cacnb3P54285 484 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Adcy8P97490 1249 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Trim43aQ3TL54 445 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 C87499Q3UX49 493 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ppp2r5dQ91V89 594 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 EpgnQ924X1 152 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Psma8Q9CWH6 250 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Aldh1b1Q9CZS1 519 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Fmnl1Q9JL26 1094 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Cbx8Q9QXV1 362 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gdap1O88741 358 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 PrphP15331 475 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Krt19P19001 403 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Trip13Q3UA06 432 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 SlmapQ3URD3 845 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Zbtb7bQ64321 544 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Atp2a3Q64518 1038 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Sv2cQ69ZS6 727 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Klhl29Q80T74 875 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Scfd1Q8BRF7 639 aaKnown RBP10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 GlyctkQ8QZY2 523 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Znrd1-asQ8R0E5 213 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Cplx3Q8R1B5 158 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 BaatQ91X34 420 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Serpinb3bQ9D1Q5 387 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 AacsQ9D2R0 672 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Taf4E9QAP7 1042 aaKnown RBP10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Calb1P12658 261 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Exosc10P56960 887 aaKnown RBP10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Smarcad1Q04692 1021 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Kctd1Q5M956 257 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 GartQ64737 1010 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Kcnv2Q8CFS6 562 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Eif3cQ8R1B4 911 aaKnown RBP10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Lman1lQ8VCD3 505 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Kctd10Q922M3 315 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Q9DAQ4 598 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Nek3Q9R0A5 511 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Shank2Q80Z38 1476 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Xrcc5P27641 732 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 YwhaeP62259 255 aaKnown RBP10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Nbr1P97432 988 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Zmym1Q3TJB1 983 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Krt12Q64291 487 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Cacna2d2Q6PHS9 1154 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Slc9c1Q6UJY2 1175 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ireb2Q811J3 963 aaKnown RBP10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 L3mbtl3Q8BLB7 883 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Lrrc8cQ8R502 803 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gpsm2Q8VDU0 679 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Yipf1Q91VU1 306 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Mrpl11Q9CQF0 192 aaKnown RBP10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Eif4enif1Q9EST3 983 aaKnown RBP10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Trpc3Q9QZC1 836 aa10.77□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Sipa1l2Q80TE4 1722 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Cep85lA0A1W2P884 806 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Xrcc6P23475 608 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Alppl2P24823 529 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 RcvrnP34057 202 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nr2f2P43135 414 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 FerP70451 823 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Slc9a2Q3ZAS0 814 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Pnma5Q5DTT8 618 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Gas7Q60780 421 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Phf23Q8BSN5 401 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Galnt15Q9D2N8 638 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Krt36B1AQ75 473 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Apol11aE9PZG0 334 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Zfp94E9Q6Y4 486 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ccng2O08918 344 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 HomezQ80W88 542 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Sulf1Q8K007 870 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Trim42Q9D2H5 723 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nr2e3Q9QXZ7 395 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Magi2Q9WVQ1 1275 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Pex11aQ9Z211 246 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Lonrf2B2RT44 518 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Mroh8E9PYI4 1049 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Chrna5Q2MKA5 467 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Q3TYL0 343 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Adgrg6Q6F3F9 1165 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 GypcQ78HU7 95 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Zmynd15Q8C0R7 736 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Appl2Q8K3G9 662 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Dnajc17Q91WT4 303 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Spdl1Q923A2 608 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Dbndd2Q9CRD4 158 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Snrnp35Q9D384 244 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 MesdQ9ERE7 224 aa10.77□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nr1i3O35627 358 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Stk10O55098 966 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tph1P17532 447 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Dab2P98078 766 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Zfyve27Q3TXX3 415 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Kctd16Q5DTY9 427 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms