RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 ErmardE9Q048 622 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 AoahO35298 574 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 FosP01101 380 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Epb41l4aP52963 686 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Fam183bQ5NC57 135 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 FntaQ61239 377 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ccdc89Q9DA73 370 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 EcsitQ9QZH6 435 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Slfn14V9GXG1 899 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Stat4P42228 749 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Stim2P83093 746 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Mcl1P97287 331 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Nt5c2Q3V1L4 560 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ccdc57Q6PHN1 1016 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Tmc3Q7TQ69 1130 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Leng8Q8CBY3 785 aaKnown RBP14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Dcaf8Q8N7N5 591 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 AagabQ8R2R3 316 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Rpap2Q8VC34 614 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Klhl20Q8VCK5 604 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 CrygnQ8VHL5 183 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Dqx1Q924H9 718 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Rfc4Q99J62 364 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ubiad1Q9DC60 336 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Eid1Q9DCR4 169 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Lypla2Q9WTL7 231 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Slc12a7Q9WVL3 1083 aa14.03□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Trappc11B2RXC1 1133 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ttc6G3UYY4 1857 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Actn4P57780 912 aaKnown RBP14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Xxylt1Q3U4G3 392 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Gxylt1Q3UHH8 404 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Prom2Q3UUY6 835 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Rsad1Q5SUV1 442 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 CbarpQ66L44 698 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Swap70Q6A028 585 aaKnown RBP14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Bpifb6Q8BU51 449 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Olfr805Q8VFI4 319 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 PccaQ91ZA3 724 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Lrrc57Q9D1G5 239 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Klra10Q9R1G6 266 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Eif2ak1Q9Z2R9 619 aa14.02□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Lcmt1A0A0U1RNF2 332 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ttc38A3KMP2 465 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Krt36B1AQ75 473 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Vmn2r78K7N6U5 853 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Rad51bO35719 350 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Eps15P42567 897 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gfpt1P47856 697 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Nek5Q7TSC3 627 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Vgll2Q8BGW8 322 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Plcg2Q8CIH5 1265 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Col23a1Q8K4G2 532 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Prkab1Q9R078 270 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 DexiQ9WUQ7 95 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 NynrinQ5DTZ0 1840 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Frmpd3A0A140LIW3 1774 aa14.02□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gm3095E9Q058 166 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 KhsrpQ3U0V1 748 aaKnown RBP14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Krit1Q6S5J6 736 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Rab11fip4Q8BQP8 635 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Borcs6Q9D6W8 360 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Add1Q9QYC0 735 aaKnown RBP14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Prpf40aQ9R1C7 953 aaKnown RBP14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 MybP06876 636 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 CnpP16330 420 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gna14P30677 355 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ncf1Q09014 390 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Lrrc36Q3V0M2 755 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Meis1Q60954 390 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Mmgt1Q8K273 131 aaKnown RBP14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 1700020D05RikQ99PB1 294 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Cbx8Q9QXV1 362 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Adamtsl1Q8BLI0 1745 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Usp31E9Q6Y8 1344 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 GabreA2AMW3 916 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ttll10A4Q9F3 704 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Mmp15O54732 657 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Arhgap6O54834 987 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Senp1P59110 640 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Sh3gl1Q62419 368 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 GartQ64737 1010 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 March6Q6ZQ89 909 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gpr101Q80T62 511 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Vipas39Q8BGQ1 491 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Chtf18Q8BIW9 969 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Calhm4Q8CE93 315 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ppp1r3aQ99MR9 1089 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Mettl16Q9CQG2 553 aaKnown RBP14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ccdc43Q9CR29 222 aaKnown RBP14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 PpihQ9D868 188 aa14.01□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Itgb4A2A863 1818 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Zfp984A2A7A2 547 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Hoxa13Q62424 386 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Naa35Q6PHQ8 725 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Erp44Q9D1Q6 406 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Mxra8Q9DBV4 442 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Kcnh2O35219 1162 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Pgrmc1O55022 195 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Nr2f2P43135 414 aa14□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms