RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 MUM3Q08750 479 aa2.24□□□□□ -2.05
snR54snR54 FDH1Q08911 376 aa2.24□□□□□ -2.05
snR54snR54 YLR278CQ05854 1341 aa2.23□□□□□ -2.05
snR54snR54 GCN4P03069 281 aa2.23□□□□□ -2.05
snR54snR54 NFT1P0CE68 1218 aa2.23□□□□□ -2.05
snR54snR54 MET8P15807 274 aa2.23□□□□□ -2.05
snR54snR54 SLY1P22213 666 aa2.23□□□□□ -2.05
snR54snR54 IDH2P28241 369 aaKnown RBP2.23□□□□□ -2.05
snR54snR54 MNS1P32906 549 aa2.23□□□□□ -2.05
snR54snR54 CCT2P39076 527 aaKnown RBP2.23□□□□□ -2.05
snR54snR54 RMD8P43620 662 aa2.23□□□□□ -2.05
snR54snR54 YGR149WP48236 432 aa2.23□□□□□ -2.05
snR54snR54 NCS2P53923 493 aaPredicted RBP2.23□□□□□ -2.05
snR54snR54 SVL3Q03088 825 aaKnown RBP2.23□□□□□ -2.05
snR54snR54 YDR387CQ04162 555 aa2.23□□□□□ -2.05
snR54snR54 CCH1P50077 2039 aa2.23□□□□□ -2.05
snR54snR54 ECM25P32525 599 aa2.22□□□□□ -2.05
snR54snR54 MRPL10P36520 322 aa2.22□□□□□ -2.05
snR54snR54 VMA13P41807 478 aaKnown RBP2.22□□□□□ -2.05
snR54snR54 SSU1P41930 458 aa2.22□□□□□ -2.05
snR54snR54 SSN8P47821 323 aa2.22□□□□□ -2.05
snR54snR54 TWF1P53250 332 aa2.22□□□□□ -2.05
snR54snR54 MTM1P53320 366 aa2.22□□□□□ -2.05
snR54snR54 CWC25P53854 179 aaKnown RBP2.22□□□□□ -2.05
snR54snR54 TIM10P87108 93 aa2.22□□□□□ -2.05
snR54snR54 PEX25Q02969 394 aa2.22□□□□□ -2.05
snR54snR54 TIM18Q08749 192 aa2.22□□□□□ -2.05
snR54snR54 PKH2Q12236 1081 aaKnown RBP2.22□□□□□ -2.05
snR54snR54 CYC3P06182 269 aa2.21□□□□□ -2.06
snR54snR54 RHO2P06781 192 aa2.21□□□□□ -2.06
snR54snR54 OCA4P25366 362 aa2.21□□□□□ -2.06
snR54snR54 RAD14P28519 371 aa2.21□□□□□ -2.06
snR54snR54 APE2P32454 952 aaKnown RBP2.21□□□□□ -2.06
snR54snR54 NIP100P33420 868 aa2.21□□□□□ -2.06
snR54snR54 PMT1P33775 817 aa2.21□□□□□ -2.06
snR54snR54 SPO22P40511 975 aa2.21□□□□□ -2.06
snR54snR54 TFG2P41896 400 aaPredicted RBP2.21□□□□□ -2.06
snR54snR54 BRO1P48582 844 aa2.21□□□□□ -2.06
snR54snR54 DSL1P53847 754 aa2.21□□□□□ -2.06
snR54snR54 RSN1Q03516 953 aa2.21□□□□□ -2.06
snR54snR54 SNX3Q08826 162 aaKnown RBP2.21□□□□□ -2.06
snR54snR54 ATG29Q12092 213 aa2.21□□□□□ -2.06
snR54snR54 RPI1P23250 407 aaKnown RBP2.2□□□□□ -2.06
snR54snR54 PRP21P32524 280 aaPredicted RBP2.2□□□□□ -2.06
snR54snR54 CMC1P36064 111 aa2.2□□□□□ -2.06
snR54snR54 MRP21P38175 177 aa2.2□□□□□ -2.06
snR54snR54 FRE4P53746 719 aa2.2□□□□□ -2.06
snR54snR54 RPT6Q01939 405 aaKnown RBP2.2□□□□□ -2.06
snR54snR54 GPI10P30777 616 aa2.19□□□□□ -2.06
snR54snR54 SEC66P33754 206 aa2.19□□□□□ -2.06
snR54snR54 HXT14P42833 540 aa2.19□□□□□ -2.06
snR54snR54 RMD9P53140 646 aaKnown RBP2.19□□□□□ -2.06
snR54snR54 YIF1P53845 314 aaKnown RBP2.19□□□□□ -2.06
snR54snR54 YMR181CQ03231 154 aa2.19□□□□□ -2.06
snR54snR54 SYF1Q04048 859 aaPredicted RBP2.19□□□□□ -2.06
snR54snR54 HSP31Q04432 237 aa2.19□□□□□ -2.06
snR54snR54 AHC1Q12433 566 aa2.19□□□□□ -2.06
snR54snR54 GFD2P25370 566 aaKnown RBP2.18□□□□□ -2.06
snR54snR54 POP5P28005 173 aa2.18□□□□□ -2.06
snR54snR54 MUD1P32605 298 aaKnown RBP2.18□□□□□ -2.06
snR54snR54 GYP6P32806 458 aa2.18□□□□□ -2.06
snR54snR54 REC114P32841 428 aa2.18□□□□□ -2.06
snR54snR54 ECM27P47144 725 aa2.18□□□□□ -2.06
snR54snR54 YNR048WP53740 393 aa2.18□□□□□ -2.06
snR54snR54 HIS4P00815 799 aaKnown RBP2.17□□□□□ -2.06
snR54snR54 TEF1P02994 458 aaKnown RBP2.17□□□□□ -2.06
snR54snR54 ARG3P05150 338 aa2.17□□□□□ -2.06
snR54snR54 HSP26P15992 214 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
snR54snR54 PPH22P23595 377 aa2.17□□□□□ -2.06
snR54snR54 KAR9P32526 644 aa2.17□□□□□ -2.06
snR54snR54 KKQ8P36004 724 aa2.17□□□□□ -2.06
snR54snR54 VID24P38263 362 aa2.17□□□□□ -2.06
snR54snR54 MET18P40469 1032 aa2.17□□□□□ -2.06
snR54snR54 IMH1Q06704 911 aaKnown RBP2.17□□□□□ -2.06
snR54snR54 TOP1P04786 769 aa2.16□□□□□ -2.06
snR54snR54 ILV5P06168 395 aaKnown RBP2.16□□□□□ -2.06
snR54snR54 SPS4P09937 338 aa2.16□□□□□ -2.06
snR54snR54 SNT1P25357 1226 aa2.16□□□□□ -2.06
snR54snR54 NUP2P32499 720 aa2.16□□□□□ -2.06
snR54snR54 CSE2P33308 149 aa2.16□□□□□ -2.06
snR54snR54 SLX1P38324 304 aa2.16□□□□□ -2.06
snR54snR54 LYS1P38998 373 aaRIP-Chip data2.16□□□□□ -2.06not detected
snR54snR54 UTP18P40362 594 aaPredicted RBP2.16□□□□□ -2.06
snR54snR54 SAS2P40963 338 aa2.16□□□□□ -2.06
snR54snR54 IRC25Q07951 179 aa2.16□□□□□ -2.06
snR54snR54 CUE5Q08412 411 aaKnown RBP2.16□□□□□ -2.06
snR54snR54 RIM20Q12033 661 aa2.16□□□□□ -2.06
snR54snR54 YRM1Q12340 786 aa2.16□□□□□ -2.06
snR54snR54 ORT1Q12375 292 aa2.16□□□□□ -2.06
snR54snR54 RTP1Q12751 981 aa2.16□□□□□ -2.06
snR54snR54 ARG4P04076 463 aaPredicted RBP2.15□□□□□ -2.07
snR54snR54 SEC63P14906 663 aa2.15□□□□□ -2.07
snR54snR54 HXT3P32466 567 aaKnown RBP2.15□□□□□ -2.07
snR54snR54 VHC1P38329 1120 aa2.15□□□□□ -2.07
snR54snR54 YHR054CP38780 354 aa2.15□□□□□ -2.07
snR54snR54 AIM10P39965 576 aaKnown RBP2.15□□□□□ -2.07
snR54snR54 GAB1P41733 394 aa2.15□□□□□ -2.07
snR54snR54 VTC2P43585 828 aa2.15□□□□□ -2.07
snR54snR54 HMS2P47175 358 aa2.15□□□□□ -2.07
snR54snR54 JJJ1P53863 590 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms