RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W ARO9P38840 513 aaPredicted RBP3.85□□□□□ -1.79
PUB1YNL016W FAD1P38913 306 aa3.85□□□□□ -1.79
PUB1YNL016W PET100P38958 111 aa3.85□□□□□ -1.79
PUB1YNL016W BAP3P41815 604 aa3.85□□□□□ -1.79
PUB1YNL016W DIA3P52290 468 aa3.85□□□□□ -1.79
PUB1YNL016W MTL1P53214 551 aa3.85□□□□□ -1.79
PUB1YNL016W MPP6P53725 186 aaPredicted RBP3.85□□□□□ -1.79
PUB1YNL016W IPI3P53877 555 aa3.85□□□□□ -1.79
PUB1YNL016W CTK1Q03957 528 aaKnown RBP3.85□□□□□ -1.79
PUB1YNL016W YMR130WQ04223 302 aa3.85□□□□□ -1.79
PUB1YNL016W SMA2Q04658 369 aa3.85□□□□□ -1.79
PUB1YNL016W ARG7Q04728 441 aa3.85□□□□□ -1.79
PUB1YNL016W ADE13Q05911 482 aaKnown RBP3.85□□□□□ -1.79
PUB1YNL016W MRI1Q06489 411 aaKnown RBP3.85□□□□□ -1.79
PUB1YNL016W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
PUB1YNL016W STE2D6VTK4 431 aa3.84□□□□□ -1.79
PUB1YNL016W CAR1P00812 333 aaKnown RBP3.84□□□□□ -1.79
PUB1YNL016W ARG81P05085 880 aa3.84□□□□□ -1.79
PUB1YNL016W SCH9P11792 824 aaKnown RBP3.84□□□□□ -1.79
PUB1YNL016W ART10P18634 518 aaKnown RBP3.84□□□□□ -1.79
PUB1YNL016W KGD2P19262 463 aaPredicted RBP3.84□□□□□ -1.79
PUB1YNL016W KGD1P20967 1014 aaKnown RBP3.84□□□□□ -1.79
PUB1YNL016W KRE6P32486 720 aa3.84□□□□□ -1.79
PUB1YNL016W MRPL7P36519 292 aa3.84□□□□□ -1.79
PUB1YNL016W MRPL37P36532 105 aa3.84□□□□□ -1.79
PUB1YNL016W SUL1P38359 859 aa3.84□□□□□ -1.79
PUB1YNL016W UIP3P39547 235 aa3.84□□□□□ -1.79
PUB1YNL016W MMF1P40185 145 aaKnown RBP3.84□□□□□ -1.79
PUB1YNL016W YIR016WP40572 265 aa3.84□□□□□ -1.79
PUB1YNL016W FAR3P46671 204 aa3.84□□□□□ -1.79
PUB1YNL016W BRO1P48582 844 aa3.84□□□□□ -1.79
PUB1YNL016W MPS2P53159 387 aa3.84□□□□□ -1.79
PUB1YNL016W MFM1Q02783 413 aa3.84□□□□□ -1.79
PUB1YNL016W SPO19Q03029 223 aa3.84□□□□□ -1.79
PUB1YNL016W YMR160WQ03823 816 aa3.84□□□□□ -1.79
PUB1YNL016W ERV41Q04651 352 aa3.84□□□□□ -1.79
PUB1YNL016W RGC1Q06108 1083 aaKnown RBP3.84□□□□□ -1.79
PUB1YNL016W DCS1Q06151 350 aa3.84□□□□□ -1.79
PUB1YNL016W TSR1Q07381 788 aaKnown RBP3.84□□□□□ -1.79
PUB1YNL016W DSE3Q08729 430 aa3.84□□□□□ -1.79
PUB1YNL016W RRD2Q12461 358 aa3.84□□□□□ -1.79
PUB1YNL016W ARP6Q12509 438 aa3.84□□□□□ -1.79
PUB1YNL016W MTR10Q99189 972 aa3.84□□□□□ -1.79
PUB1YNL016W BEM2P39960 2167 aaKnown RBP3.84□□□□□ -1.8
PUB1YNL016W CAR2P07991 424 aaKnown RBP3.83□□□□□ -1.8
PUB1YNL016W SSA3P09435 649 aaKnown RBP3.83□□□□□ -1.8
PUB1YNL016W SAG1P20840 650 aa3.83□□□□□ -1.8
PUB1YNL016W HCM1P25364 564 aa3.83□□□□□ -1.8
PUB1YNL016W YCL068CP25593 260 aa3.83□□□□□ -1.8
PUB1YNL016W GEX1P25596 615 aa3.83□□□□□ -1.8
PUB1YNL016W BUD2P33314 1104 aa3.83□□□□□ -1.8
PUB1YNL016W PHO11P35842 467 aa3.83□□□□□ -1.8
PUB1YNL016W HES1P35843 434 aa3.83□□□□□ -1.8
PUB1YNL016W PHO12P38693 467 aa3.83□□□□□ -1.8
PUB1YNL016W YHL026CP38740 315 aa3.83□□□□□ -1.8
PUB1YNL016W RPP1P38786 293 aa3.83□□□□□ -1.8
PUB1YNL016W SCC4P40090 624 aa3.83□□□□□ -1.8
PUB1YNL016W BUR6P40096 142 aa3.83□□□□□ -1.8
PUB1YNL016W CIN1P40987 1014 aa3.83□□□□□ -1.8
PUB1YNL016W FKH2P41813 862 aa3.83□□□□□ -1.8
PUB1YNL016W CHA4P43634 648 aa3.83□□□□□ -1.8
PUB1YNL016W NMD5P46970 1048 aa3.83□□□□□ -1.8
PUB1YNL016W ECL1P48235 211 aa3.83□□□□□ -1.8
PUB1YNL016W GTO1P48239 356 aa3.83□□□□□ -1.8
PUB1YNL016W MSY1P48527 492 aa3.83□□□□□ -1.8
PUB1YNL016W VPS73P53142 486 aaKnown RBP3.83□□□□□ -1.8
PUB1YNL016W PNC1P53184 216 aaKnown RBP3.83□□□□□ -1.8
PUB1YNL016W CGR1P53188 120 aa3.83□□□□□ -1.8
PUB1YNL016W YLR173WQ06247 608 aa3.83□□□□□ -1.8
PUB1YNL016W BCP1Q06338 283 aa3.83□□□□□ -1.8
PUB1YNL016W IZH3Q07959 543 aa3.83□□□□□ -1.8
PUB1YNL016W VAM3Q12241 283 aa3.83□□□□□ -1.8
PUB1YNL016W ACC1Q00955 2233 aaKnown RBP3.83□□□□□ -1.8
PUB1YNL016W GAL10P04397 699 aa3.82□□□□□ -1.8
PUB1YNL016W LEU4P06208 619 aaKnown RBP3.82□□□□□ -1.8
PUB1YNL016W PRB1P09232 635 aa3.82□□□□□ -1.8
PUB1YNL016W SPS4P09937 338 aa3.82□□□□□ -1.8
PUB1YNL016W RPL31BP0C2H9 113 aaKnown RBP3.82□□□□□ -1.8
PUB1YNL016W UGA1P17649 471 aa3.82□□□□□ -1.8
PUB1YNL016W GAS1P22146 559 aaKnown RBP3.82□□□□□ -1.8
PUB1YNL016W ELO2P25358 347 aa3.82□□□□□ -1.8
PUB1YNL016W GSH1P32477 678 aa3.82□□□□□ -1.8
PUB1YNL016W HIR2P32480 875 aa3.82□□□□□ -1.8
PUB1YNL016W CDC5P32562 705 aa3.82□□□□□ -1.8
PUB1YNL016W SNU114P36048 1008 aaKnown RBP3.82□□□□□ -1.8
PUB1YNL016W MSR1P38714 643 aa3.82□□□□□ -1.8
PUB1YNL016W PTC7P38797 343 aa3.82□□□□□ -1.8
PUB1YNL016W FMO1P38866 432 aa3.82□□□□□ -1.8
PUB1YNL016W PHM8P40025 321 aa3.82□□□□□ -1.8
PUB1YNL016W PIG2P40187 538 aa3.82□□□□□ -1.8
PUB1YNL016W AIM20P40451 204 aa3.82□□□□□ -1.8
PUB1YNL016W MND1P53102 219 aa3.82□□□□□ -1.8
PUB1YNL016W RTT102P53330 157 aa3.82□□□□□ -1.8
PUB1YNL016W YNL134CP53912 376 aaKnown RBP3.82□□□□□ -1.8
PUB1YNL016W SNZ1Q03148 297 aa3.82□□□□□ -1.8
PUB1YNL016W YMR102CQ03177 834 aa3.82□□□□□ -1.8
PUB1YNL016W MRPS17Q03246 237 aaPredicted RBP3.82□□□□□ -1.8
PUB1YNL016W SLK19Q08581 821 aaKnown RBP3.82□□□□□ -1.8
PUB1YNL016W YOR352WQ08816 343 aa3.82□□□□□ -1.8
PUB1YNL016W LEA1Q08963 238 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms