RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C COQ1P18900 473 aa1.06□□□□□ -2.24
VAM6YDL077C MRPL33P20084 86 aa1.06□□□□□ -2.24
VAM6YDL077C IDP1P21954 428 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C PPH22P23595 377 aa1.06□□□□□ -2.24
VAM6YDL077C AGP1P25376 633 aa1.06□□□□□ -2.24
VAM6YDL077C KAR4P25583 335 aa1.06□□□□□ -2.24
VAM6YDL077C AAD3P25612 363 aa1.06□□□□□ -2.24
VAM6YDL077C ADY2P25613 283 aa1.06□□□□□ -2.24
VAM6YDL077C PRP45P28004 379 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C RPL8BP29453 256 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C MLS1P30952 554 aa1.06□□□□□ -2.24
VAM6YDL077C PRO3P32263 286 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C IMP2'P32351 346 aa1.06□□□□□ -2.24
VAM6YDL077C MCM10P32354 571 aa1.06□□□□□ -2.24
VAM6YDL077C NGG1P32494 702 aa1.06□□□□□ -2.24
VAM6YDL077C WBP1P33767 430 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C SIP2P34164 415 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C SRP102P36057 244 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C CMC1P36064 111 aa1.06□□□□□ -2.24
VAM6YDL077C NUP133P36161 1157 aa1.06□□□□□ -2.24
VAM6YDL077C LDH1P38139 375 aa1.06□□□□□ -2.24
VAM6YDL077C POA1P38218 177 aa1.06□□□□□ -2.24
VAM6YDL077C VHC1P38329 1120 aa1.06□□□□□ -2.24
VAM6YDL077C IPI1P38803 334 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C MNL1P38888 796 aa1.06□□□□□ -2.24
VAM6YDL077C IPL1P38991 367 aa1.06□□□□□ -2.24
VAM6YDL077C STM1P39015 273 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C NOP16P40007 231 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C ISC1P40015 477 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C UBP7P40453 1071 aa1.06□□□□□ -2.24
VAM6YDL077C TMA108P40462 946 aa1.06□□□□□ -2.24
VAM6YDL077C ASG1P40467 964 aa1.06□□□□□ -2.24
VAM6YDL077C FIS1P40515 155 aa1.06□□□□□ -2.24
VAM6YDL077C PKP1P40530 394 aa1.06□□□□□ -2.24
VAM6YDL077C SER2P42941 309 aa1.06□□□□□ -2.24
VAM6YDL077C BUD13P46947 266 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C ECM27P47144 725 aa1.06□□□□□ -2.24
VAM6YDL077C SRB7P47822 140 aa1.06□□□□□ -2.24
VAM6YDL077C GTO1P48239 356 aa1.06□□□□□ -2.24
VAM6YDL077C RNR4P49723 345 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C SLD3P53135 668 aa1.06□□□□□ -2.24
VAM6YDL077C YGR017WP53210 297 aa1.06□□□□□ -2.24
VAM6YDL077C CPR6P53691 371 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C PRM1P53835 661 aa1.06□□□□□ -2.24
VAM6YDL077C YNL095CP53932 642 aa1.06□□□□□ -2.24
VAM6YDL077C OCA2P53949 197 aa1.06□□□□□ -2.24
VAM6YDL077C KTR5P53966 522 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C RPL34AP87262 121 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C ECM9Q02202 377 aa1.06□□□□□ -2.24
VAM6YDL077C MSC1Q03104 513 aa1.06□□□□□ -2.24
VAM6YDL077C PRM15Q03262 622 aa1.06□□□□□ -2.24
VAM6YDL077C SCS7Q03529 384 aa1.06□□□□□ -2.24
VAM6YDL077C NHX1Q04121 633 aa1.06□□□□□ -2.24
VAM6YDL077C UTP14Q04500 899 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C SPR28Q04921 423 aa1.06□□□□□ -2.24
VAM6YDL077C HOF1Q05080 669 aa1.06□□□□□ -2.24
VAM6YDL077C UTP21Q06078 939 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C MRI1Q06489 411 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C NTG2Q08214 380 aa1.06□□□□□ -2.24
VAM6YDL077C REX4Q08237 289 aa1.06□□□□□ -2.24
VAM6YDL077C SGT1Q08446 395 aa1.06□□□□□ -2.24
VAM6YDL077C YLR053CQ12026 108 aa1.06□□□□□ -2.24
VAM6YDL077C WRS1Q12109 432 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C PSY3Q12318 242 aa1.06□□□□□ -2.24
VAM6YDL077C YGR161W-CQ3E744 92 aa1.06□□□□□ -2.24
VAM6YDL077C YOL159C-AQ3E769 90 aa1.06□□□□□ -2.24
VAM6YDL077C HSH49Q99181 213 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C YOS9Q99220 542 aa1.06□□□□□ -2.24
VAM6YDL077C SAS5Q99314 248 aa1.06□□□□□ -2.24
VAM6YDL077C VCX1Q99385 411 aa1.06□□□□□ -2.24
VAM6YDL077C THS1P04801 734 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C GPH1P06738 902 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C GCR1P07261 785 aa1.05□□□□□ -2.24
VAM6YDL077C CAR2P07991 424 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C FBP1P09201 348 aa1.05□□□□□ -2.24
VAM6YDL077C PRB1P09232 635 aa1.05□□□□□ -2.24
VAM6YDL077C RPS24AP0CX31 135 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C RPS24BP0CX32 135 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C RAD18P10862 487 aa1.05□□□□□ -2.24
VAM6YDL077C SNF3P10870 884 aa1.05□□□□□ -2.24
VAM6YDL077C FUS1P11710 512 aa1.05□□□□□ -2.24
VAM6YDL077C FRS1P15624 595 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C YPK2P18961 677 aa1.05□□□□□ -2.24
VAM6YDL077C PHO80P20052 293 aa1.05□□□□□ -2.24
VAM6YDL077C GAS1P22146 559 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C TRX2P22803 104 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C SRO9P25567 434 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C HEM3P28789 327 aa1.05□□□□□ -2.24
VAM6YDL077C PRE4P30657 266 aa1.05□□□□□ -2.24
VAM6YDL077C DBF4P32325 704 aa1.05□□□□□ -2.24
VAM6YDL077C PHA2P32452 334 aa1.05□□□□□ -2.24
VAM6YDL077C CDC12P32468 407 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C AEP1P32493 518 aa1.05□□□□□ -2.24
VAM6YDL077C YEF1P32622 495 aa1.05□□□□□ -2.24
VAM6YDL077C IMP3P32899 183 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C YPT7P32939 208 aa1.05□□□□□ -2.24
VAM6YDL077C DRE2P36152 348 aa1.05□□□□□ -2.24
VAM6YDL077C SRO77P38163 1010 aa1.05□□□□□ -2.24
VAM6YDL077C APN2P38207 520 aa1.05□□□□□ -2.24
VAM6YDL077C YPC1P38298 316 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms