RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C NOP4P37838 685 aaKnown RBP2.63□□□□□ -1.99
TRS20YBR254C YHR131CP38835 850 aa2.63□□□□□ -1.99
TRS20YBR254C SSN8P47821 323 aa2.63□□□□□ -1.99
TRS20YBR254C BRO1P48582 844 aa2.63□□□□□ -1.99
TRS20YBR254C RNY1Q02933 434 aaKnown RBP2.63□□□□□ -1.99
TRS20YBR254C TAP42Q04372 366 aa2.63□□□□□ -1.99
TRS20YBR254C TIM18Q08749 192 aa2.63□□□□□ -1.99
TRS20YBR254C FOB1O13329 566 aa2.62□□□□□ -1.99
TRS20YBR254C HSP26P15992 214 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
TRS20YBR254C SLY1P22213 666 aa2.62□□□□□ -1.99
TRS20YBR254C SSU1P41930 458 aa2.62□□□□□ -1.99
TRS20YBR254C SVL3Q03088 825 aaKnown RBP2.62□□□□□ -1.99
TRS20YBR254C YDR056CQ12025 205 aa2.62□□□□□ -1.99
TRS20YBR254C PKH2Q12236 1081 aaKnown RBP2.62□□□□□ -1.99
TRS20YBR254C SEC39Q12745 709 aa2.62□□□□□ -1.99
TRS20YBR254C HCS1P34243 683 aa2.61□□□□□ -1.99
TRS20YBR254C CST26P38226 397 aa2.61□□□□□ -1.99
TRS20YBR254C YEL057CP39983 233 aa2.61□□□□□ -1.99
TRS20YBR254C VPS75P53853 264 aa2.61□□□□□ -1.99
TRS20YBR254C NCS2P53923 493 aaPredicted RBP2.61□□□□□ -1.99
TRS20YBR254C YDR239CQ03780 787 aa2.61□□□□□ -1.99
TRS20YBR254C CYC3P06182 269 aa2.6□□□□□ -1.99
TRS20YBR254C AFG1P32317 509 aa2.6□□□□□ -1.99
TRS20YBR254C CCT2P39076 527 aaKnown RBP2.6□□□□□ -1.99
TRS20YBR254C MET28P40573 187 aa2.6□□□□□ -1.99
TRS20YBR254C MDG1P53885 366 aa2.6□□□□□ -1.99
TRS20YBR254C YMR181CQ03231 154 aa2.6□□□□□ -1.99
TRS20YBR254C YDR387CQ04162 555 aa2.6□□□□□ -1.99
TRS20YBR254C MRD1Q06106 887 aaKnown RBP2.6□□□□□ -1.99
TRS20YBR254C SNX3Q08826 162 aaKnown RBP2.6□□□□□ -1.99
TRS20YBR254C RHO2P06781 192 aa2.59□□□□□ -1.99
TRS20YBR254C SPB1P25582 841 aaPredicted RBP2.59□□□□□ -1.99
TRS20YBR254C IDH2P28241 369 aaKnown RBP2.59□□□□□ -1.99
TRS20YBR254C RPN12P32496 274 aa2.59□□□□□ -1.99
TRS20YBR254C NUP2P32499 720 aa2.59□□□□□ -1.99
TRS20YBR254C ECM25P32525 599 aa2.59□□□□□ -1.99
TRS20YBR254C MID2P36027 376 aa2.59□□□□□ -1.99
TRS20YBR254C FRE4P53746 719 aa2.59□□□□□ -1.99
TRS20YBR254C DSL1P53847 754 aa2.59□□□□□ -1.99
TRS20YBR254C COG4Q06096 861 aa2.59□□□□□ -1.99
TRS20YBR254C FAB1P34756 2278 aa2.59□□□□□ -1.99
TRS20YBR254C RAD14P28519 371 aa2.58□□□□□ -2
TRS20YBR254C PRP21P32524 280 aaPredicted RBP2.58□□□□□ -2
TRS20YBR254C KAR9P32526 644 aa2.58□□□□□ -2
TRS20YBR254C GYP6P32806 458 aa2.58□□□□□ -2
TRS20YBR254C GAB1P41733 394 aa2.58□□□□□ -2
TRS20YBR254C VMA13P41807 478 aaKnown RBP2.58□□□□□ -2
TRS20YBR254C TFG2P41896 400 aaPredicted RBP2.58□□□□□ -2
TRS20YBR254C YGR149WP48236 432 aa2.58□□□□□ -2
TRS20YBR254C TWF1P53250 332 aa2.58□□□□□ -2
TRS20YBR254C ARE2P53629 642 aaKnown RBP2.58□□□□□ -2
TRS20YBR254C IRC25Q07951 179 aa2.58□□□□□ -2
TRS20YBR254C RRI2Q12348 645 aa2.58□□□□□ -2
TRS20YBR254C POP5P28005 173 aa2.57□□□□□ -2
TRS20YBR254C MUD1P32605 298 aaKnown RBP2.57□□□□□ -2
TRS20YBR254C KKQ8P36004 724 aa2.57□□□□□ -2
TRS20YBR254C VID24P38263 362 aa2.57□□□□□ -2
TRS20YBR254C ECM27P47144 725 aa2.57□□□□□ -2
TRS20YBR254C RMD9P53140 646 aaKnown RBP2.57□□□□□ -2
TRS20YBR254C YNR048WP53740 393 aa2.57□□□□□ -2
TRS20YBR254C HSP31Q04432 237 aa2.57□□□□□ -2
TRS20YBR254C TSR2Q06672 205 aaKnown RBP2.57□□□□□ -2
TRS20YBR254C CUE5Q08412 411 aaKnown RBP2.57□□□□□ -2
TRS20YBR254C YLR278CQ05854 1341 aa2.57□□□□□ -2
TRS20YBR254C INH1P01097 85 aa2.56□□□□□ -2
TRS20YBR254C TEF1P02994 458 aaKnown RBP2.56□□□□□ -2
TRS20YBR254C GCN4P03069 281 aa2.56□□□□□ -2
TRS20YBR254C IMP2'P32351 346 aa2.56□□□□□ -2
TRS20YBR254C APE2P32454 952 aaKnown RBP2.56□□□□□ -2
TRS20YBR254C REC114P32841 428 aa2.56□□□□□ -2
TRS20YBR254C CSE2P33308 149 aa2.56□□□□□ -2
TRS20YBR254C NIP100P33420 868 aa2.56□□□□□ -2
TRS20YBR254C UTP18P40362 594 aaPredicted RBP2.56□□□□□ -2
TRS20YBR254C RMD8P43620 662 aa2.56□□□□□ -2
TRS20YBR254C YJR085CP47131 105 aaKnown RBP2.56□□□□□ -2
TRS20YBR254C YIF1P53845 314 aaKnown RBP2.56□□□□□ -2
TRS20YBR254C AHC1Q12433 566 aa2.56□□□□□ -2
TRS20YBR254C RTP1Q12751 981 aa2.56□□□□□ -2
TRS20YBR254C RPI1P23250 407 aaKnown RBP2.55□□□□□ -2
TRS20YBR254C SEC66P33754 206 aa2.55□□□□□ -2
TRS20YBR254C PMT1P33775 817 aa2.55□□□□□ -2
TRS20YBR254C CMC1P36064 111 aa2.55□□□□□ -2
TRS20YBR254C JNM1P36224 373 aa2.55□□□□□ -2
TRS20YBR254C LYS1P38998 373 aaRIP-Chip data2.55□□□□□ -2not detected
TRS20YBR254C NOC2P39744 710 aaKnown RBP2.55□□□□□ -2
TRS20YBR254C AIM10P39965 576 aaKnown RBP2.55□□□□□ -2
TRS20YBR254C YML133CQ03099 1374 aa2.55□□□□□ -2
TRS20YBR254C YLL067CQ07888 1374 aa2.55□□□□□ -2
TRS20YBR254C MED1Q12321 566 aa2.55□□□□□ -2
TRS20YBR254C YLL066CQ99208 1374 aa2.55□□□□□ -2
TRS20YBR254C MET8P15807 274 aa2.54□□□□□ -2
TRS20YBR254C SNT1P25357 1226 aa2.54□□□□□ -2
TRS20YBR254C NPL6P32832 435 aa2.54□□□□□ -2
TRS20YBR254C SIM1P40472 476 aa2.54□□□□□ -2
TRS20YBR254C SYF1Q04048 859 aaPredicted RBP2.54□□□□□ -2
TRS20YBR254C ATG29Q12092 213 aa2.54□□□□□ -2
TRS20YBR254C ORT1Q12375 292 aa2.54□□□□□ -2
TRS20YBR254C HIS4P00815 799 aaKnown RBP2.53□□□□□ -2
TRS20YBR254C ARG4P04076 463 aaPredicted RBP2.53□□□□□ -2
TRS20YBR254C MRP7P12687 371 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms