RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PCP11498 1178 aaKnown RBP8.65□□□□□ -1.02
PHGDH-225ENST00000641720 ACTN1P12814 892 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 KCNA5P22460 613 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 IRS1P35568 1242 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 SLC4A3P48751 1232 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 STAT2P52630 851 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 ANTXR2P58335 489 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 PWP2Q15269 919 aaKnown RBP8.65□□□□□ -1.02
PHGDH-225ENST00000641720 CTC1Q2NKJ3 1217 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 PTCRAQ6ISU1 281 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-225ENST00000641720 CYB5R4Q7L1T6 521 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 MB21D2Q8IYB1 491 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-225ENST00000641720 AFAP1L1Q8TED9 768 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 ZKSCAN3Q9BRR0 538 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 C17orf80Q9BSJ5 609 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 USP26Q9BXU7 913 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 OSBPL7Q9BZF2 842 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 WDR11Q9BZH6 1224 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 RANBP17Q9H2T7 1088 aaKnown RBP8.65□□□□□ -1.02
PHGDH-225ENST00000641720 ZNF287Q9HBT7 754 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 SNX14Q9Y5W7 946 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 TPRP12270 2363 aaKnown RBP8.65□□□□□ -1.02
PHGDH-225ENST00000641720 NCOR2Q9Y618 2525 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 OTOGLQ3ZCN5 2332 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 ZEB2O60315 1214 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 ALAS1P13196 640 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 ARHGAP1Q07960 439 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 TCF15Q12870 199 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 BAATQ14032 418 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-225ENST00000641720 RCSD1Q6JBY9 416 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 CNKSR3Q6P9H4 555 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 BTNL9Q6UXG8 535 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 SLC30A10Q6XR72 485 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 KCTD1Q719H9 257 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 NOL8Q76FK4 1167 aaKnown RBP8.64□□□□□ -1.03
PHGDH-225ENST00000641720 FAM160B2Q86V87 743 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 ZNF444Q8N0Y2 327 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-225ENST00000641720 CAGE1Q8TC20 777 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 ESR2Q92731 530 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 TGS1Q96RS0 853 aaKnown RBP8.64□□□□□ -1.03
PHGDH-225ENST00000641720 RAD9AQ99638 391 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 KRT23Q9C075 422 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 CNNM2Q9H8M5 875 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 GPHNQ9NQX3 736 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-225ENST00000641720 FOXD4L1Q9NU39 408 aa8.64□□□□□ -1.03
PHGDH-225ENST00000641720 EVPLQ92817 2033 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 H3BQ06 376 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 HAS3O00219 553 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 ICAM1P05362 532 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 MYL3P08590 195 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 CKBP12277 381 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 HOXD8P13378 290 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 ALADP13716 330 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 CPA1P15085 419 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 HOXC8P31273 242 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 CPT1AP50416 773 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 DLX2Q07687 328 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 HERC4Q5GLZ8 1057 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 IER5LQ5T953 404 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 RNF20Q5VTR2 975 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 LRRC8DQ7L1W4 858 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 CHST3Q7LGC8 479 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 RALYLQ86SE5 291 aaKnown RBP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 ENAHQ8N8S7 591 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 OR6J1Q8NGC5 347 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 PABPC5Q96DU9 382 aaKnown RBP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 MRPL38Q96DV4 380 aaKnown RBP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 TCEANC2Q96MN5 208 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 RC3H2Q9HBD1 1191 aaKnown RBP8.63□□□□□ -1.03
PHGDH-225ENST00000641720 SENP2Q9HC62 589 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 ZSWIM5Q9P217 1185 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 PRKAG3Q9UGI9 489 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 MTUS1Q9ULD2 1270 aa8.63□□□□□ -1.03
PHGDH-225ENST00000641720 C2orf16Q68DN1 1984 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 ABHD14A-ACY1A0A1B0GW23 586 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 KIF28PB7ZC32 967 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 EPB41L2O43491 1005 aaKnown RBP8.62□□□□□ -1.03
PHGDH-225ENST00000641720 PRC1O43663 620 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 MMP3P08254 477 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 SELPP16109 830 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 MCCP23508 829 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 BFSP2Q13515 415 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 SEC23AQ15436 765 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 SMAD2Q15796 467 aaKnown RBP8.62□□□□□ -1.03
PHGDH-225ENST00000641720 TSGA10IPQ3SY00 556 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 TTBK2Q6IQ55 1244 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 BMP8AQ7Z5Y6 402 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 ADHFE1Q8IWW8 467 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 NCOA7Q8NI08 942 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 CHURC1Q8WUH1 139 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 CHMP4CQ96CF2 233 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 JAKMIP1Q96N16 626 aaKnown RBP8.62□□□□□ -1.03
PHGDH-225ENST00000641720 ZSCAN10Q96SZ4 725 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-225ENST00000641720 BACH2Q9BYV9 841 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 TCP11L1Q9NUJ3 509 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 GTF2IRD1Q9UHL9 959 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 STX8Q9UNK0 236 aa8.62□□□□□ -1.03
PHGDH-225ENST00000641720 CFAP47Q6ZTR5 3102 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms