RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ABCB11O95342 1321 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 OPLAHO14841 1288 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 MED24O75448 989 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 FOSP01100 380 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-211ENST00000641213 PLA2G4BP0C869 781 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 SREBF1P36956 1147 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 SPIRE1Q08AE8 756 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 RSRC2Q7L4I2 434 aaKnown RBP18.97■□□□□ 0.63
PHGDH-211ENST00000641213 MYOCDQ8IZQ8 938 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 SPICE1Q8N0Z3 855 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 NDST4Q9H3R1 872 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 ZNF446Q9NWS9 450 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 COL4A5P29400 1685 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 A0A1W2PQJ5 194 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 CLRN2A0PK11 232 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 SPDYE3A6NKU9 549 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 TBX3O15119 743 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 CLCN6P51797 869 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 MAN2A1Q16706 1144 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 FAM26FQ5R3K3 315 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 LENG9Q96B70 501 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 TSG101Q99816 390 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 PRR12Q9ULL5 1215 aa18.97■□□□□ 0.63
PHGDH-211ENST00000641213 GOLGB1Q14789 3259 aaKnown RBP18.97■□□□□ 0.63
PHGDH-211ENST00000641213 CTAGE9A4FU28 777 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 PSMD14O00487 310 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 ECE1P42892 770 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 ZCWPW2Q504Y3 356 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 GPBP1Q86WP2 473 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 GMLQ99445 158 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 ZNF70Q9UC06 446 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-211ENST00000641213 CDC23Q9UJX2 597 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 ATAD5Q96QE3 1844 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 FAM86B1E9PN63 330 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 RAD17O75943 681 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 FAM86B2P0C5J1 330 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 HERVK_113P62684 666 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 KIF4BQ2VIQ3 1234 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 GRIPAP1Q4V328 841 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 KIAA1755Q5JYT7 1200 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 TTLL6Q8N841 843 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 FAM151AQ8WW52 585 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 IQCDQ96DY2 449 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 ARHGEF10LQ9HCE6 1279 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 ZNHIT6Q9NWK9 470 aaKnown RBP18.96■□□□□ 0.63
PHGDH-211ENST00000641213 SIK3Q9Y2K2 1263 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 PCDHA2Q9Y5H9 948 aa18.96■□□□□ 0.63
PHGDH-211ENST00000641213 CNTNAP1P78357 1384 aa18.95■□□□□ 0.62
PHGDH-211ENST00000641213 NPHP3-ACAD11A0A0J9YXS1 232 aa18.95■□□□□ 0.62
PHGDH-211ENST00000641213 VIL1P09327 827 aaKnown RBP18.95■□□□□ 0.62
PHGDH-211ENST00000641213 CYP11B2P19099 503 aa18.95■□□□□ 0.62
PHGDH-211ENST00000641213 HOXA13P31271 388 aaPredicted RBP18.95■□□□□ 0.62
PHGDH-211ENST00000641213 HAUS3Q68CZ6 603 aa18.95■□□□□ 0.62
PHGDH-211ENST00000641213 CCDC65Q8IXS2 484 aa18.95■□□□□ 0.62
PHGDH-211ENST00000641213 FGFBP2Q9BYJ0 223 aa18.95■□□□□ 0.62
PHGDH-211ENST00000641213 POTEFA5A3E0 1075 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 POTEIP0CG38 1075 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 CIITAP33076 1130 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 STAT2P52630 851 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 TUBB2AQ13885 445 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 DLGAP5Q15398 846 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 TEX35Q5T0J7 233 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 POTEGQ6S5H5 508 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 POTEEQ6S8J3 1075 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 CATSPER3Q86XQ3 398 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 RTKN2Q8IZC4 609 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 GPR161Q8N6U8 529 aaKnown RBP18.94■□□□□ 0.62
PHGDH-211ENST00000641213 ACER1Q8TDN7 264 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 PSMD1Q99460 953 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 NAPGQ99747 312 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-211ENST00000641213 TUBB2BQ9BVA1 445 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 PDGFDQ9GZP0 370 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-211ENST00000641213 HAUS4Q9H6D7 363 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 NHEJ1Q9H9Q4 299 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-211ENST00000641213 TBC1D7Q9P0N9 293 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 TRIM10Q9UDY6 481 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 GUCA1BQ9UMX6 200 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 SLC12A3P55017 1021 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 CDK17Q00537 523 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 CACNB1Q02641 598 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-211ENST00000641213 ARSHQ5FYA8 562 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 NCAPH2Q6IBW4 605 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 UBE2Q2Q8WVN8 375 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 FAM20AQ96MK3 541 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 EPC1Q9H2F5 836 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 FAM53CQ9NYF3 392 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 HDAC9Q9UKV0 1011 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 TMX2Q9Y320 296 aa18.94■□□□□ 0.62
PHGDH-211ENST00000641213 PIK3CDO00329 1044 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 CYLC1P35663 651 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-211ENST00000641213 KRT83P78385 493 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 FKBP3Q00688 224 aaKnown RBP18.93■□□□□ 0.62
PHGDH-211ENST00000641213 SRGAP1Q7Z6B7 1085 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 CCDC170Q8IYT3 715 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 LARGE2Q8N3Y3 721 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 ERMNQ8TAM6 284 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 RABGGTAQ92696 567 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 GOLGA1Q92805 767 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 ARGLU1Q9NWB6 273 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-211ENST00000641213 PITPNM2Q9BZ72 1349 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms