RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 USP2O75604 605 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-208ENST00000641023 UBXN2AP68543 259 aa19.31■□□□□ 0.68
PHGDH-208ENST00000641023 ARID5BQ14865 1188 aa19.31■□□□□ 0.68
PHGDH-208ENST00000641023 CATSPER3Q86XQ3 398 aa19.31■□□□□ 0.68
PHGDH-208ENST00000641023 TMOD4Q9NZQ9 345 aa19.31■□□□□ 0.68
PHGDH-208ENST00000641023 SSC5DA1L4H1 1573 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 BICDL2A1A5D9 508 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 E9PMD0 336 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 PPP1R12BO60237 982 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-208ENST00000641023 MED24O75448 989 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 SKILP12757 684 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 PSMD2Q13200 908 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 PRKG1Q13976 671 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 KCTD17Q8N5Z5 321 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 INTS13Q9NVM9 706 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 VAV3Q9UKW4 847 aa19.3■□□□□ 0.68
PHGDH-208ENST00000641023 LRRC10BA6NIK2 292 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 MEIS1O00470 390 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 COBLO75128 1261 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 SSBP05455 408 aaKnown RBP eCLIP19.29■□□□□ 0.68
PHGDH-208ENST00000641023 PLA2G4BP0C869 781 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 FCER1AP12319 257 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 IDEP14735 1019 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 SPECC1LQ69YQ0 1117 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 KRT26Q7Z3Y9 468 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 HOMER2Q9NSB8 354 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 SPTLC3Q9NUV7 552 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 DNM3Q9UQ16 869 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 OFD1O75665 1012 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 MAP3K9P80192 1104 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 COG2Q14746 738 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 LRCH2Q5VUJ6 765 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-208ENST00000641023 OTOP1Q7RTM1 612 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 APTXQ7Z2E3 356 aaKnown RBP19.29■□□□□ 0.68
PHGDH-208ENST00000641023 RBM46Q8TBY0 533 aaKnown RBP19.29■□□□□ 0.68
PHGDH-208ENST00000641023 ATG4CQ96DT6 458 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 TRERF1Q96PN7 1200 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 AFG3L2Q9Y4W6 797 aa19.29■□□□□ 0.68
PHGDH-208ENST00000641023 PSMD10O75832 226 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 CCNE1P24864 410 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 DSG3P32926 999 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 SLC5A5Q92911 643 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 TRIM47Q96LD4 638 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 ZNF577Q9BSK1 485 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 POLR3CQ9BUI4 534 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-208ENST00000641023 SLC39A2Q9NP94 309 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 ADD3Q9UEY8 706 aaKnown RBP19.28■□□□□ 0.68
PHGDH-208ENST00000641023 LIMA1Q9UHB6 759 aaKnown RBP19.28■□□□□ 0.68
PHGDH-208ENST00000641023 TRIM49BA6NDI0 452 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 SPATA31C1P0DKV0 1188 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 OAZ1P54368 228 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 TCP11X2Q5H9J9 407 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 MUM1L1Q5H9M0 696 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 ARMCX5Q6P1M9 558 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 C17orf53Q8N3J3 647 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-208ENST00000641023 KIAA0895Q8NCT3 520 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 NOC3LQ8WTT2 800 aaKnown RBP19.28■□□□□ 0.68
PHGDH-208ENST00000641023 P2RX5Q93086 422 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 MXRA8Q9BRK3 442 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 COL20A1Q9P218 1284 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 RPTORQ8N122 1335 aa19.28■□□□□ 0.68
PHGDH-208ENST00000641023 POTEFA5A3E0 1075 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 KCNJ18B7U540 433 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 GAS7O60861 476 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 POTEIP0CG38 1075 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 PMS1P54277 932 aaKnown RBP19.27■□□□□ 0.68
PHGDH-208ENST00000641023 RPS6P62753 249 aaKnown RBP19.27■□□□□ 0.68
PHGDH-208ENST00000641023 CCZ1BP86790 482 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 CCZ1P86791 482 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-208ENST00000641023 PPP2R5CQ13362 524 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 KCNJ12Q14500 433 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 POTEGQ6S5H5 508 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 POTEEQ6S8J3 1075 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 CATSPERGQ6ZRH7 1159 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 SYTL5Q8TDW5 730 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-208ENST00000641023 DNAJC19Q96DA6 116 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 WDR11Q9BZH6 1224 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 THAP9Q9H5L6 903 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 HOXC10Q9NYD6 342 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 ADAMTS5Q9UNA0 930 aa19.27■□□□□ 0.68
PHGDH-208ENST00000641023 BCRP11274 1271 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 EHHADHQ08426 723 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 VGLL4Q14135 290 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 TTI2Q6NXR4 508 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 RNF207Q6ZRF8 634 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-208ENST00000641023 EIF2AK1Q9BQI3 630 aaKnown RBP19.26■□□□□ 0.67
PHGDH-208ENST00000641023 PANK4Q9NVE7 773 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 CSADQ9Y600 493 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 POLR2AP24928 1970 aaKnown RBP19.26■□□□□ 0.67
PHGDH-208ENST00000641023 SRCAPQ6ZRS2 3230 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 EEF1GP26641 437 aaKnown RBP19.26■□□□□ 0.67
PHGDH-208ENST00000641023 KRT31Q15323 416 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 SH3D19Q5HYK7 790 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 DNTTIP2Q5QJE6 756 aaKnown RBP19.26■□□□□ 0.67
PHGDH-208ENST00000641023 PCNX4Q63HM2 1172 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 USP50Q70EL3 339 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-208ENST00000641023 GPBP1Q86WP2 473 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 CREBRFQ8IUR6 639 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms