RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 KIAA1217Q5T5P2 1943 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 B4DLN1 442 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 SPATA31C2B4DYI2 1134 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 LAD1O00515 517 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 DHX15O43143 795 aaKnown RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 BAG4O95429 457 aaKnown RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 TGFB3P10600 412 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 PRPHP41219 470 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 UBXN2AP68543 259 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 SETQ01105 290 aaPredicted RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 GNL2Q13823 731 aaKnown RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 KIF22Q14807 665 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 SF3A1Q15459 793 aaKnown RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 ZNF174Q15697 407 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 IL17AQ16552 155 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 MAP3K21Q5TCX8 1036 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 ARL6IP4Q66PJ3 421 aaKnown RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 TAPT1Q6NXT6 567 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 ARMCX2Q7L311 632 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 DPP9Q86TI2 863 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 TRMT44Q8IYL2 757 aaKnown RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 PXYLP1Q8TE99 480 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 LEO1Q8WVC0 666 aaPredicted RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 SLC5A5Q92911 643 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 FAM20AQ96MK3 541 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 SENP7Q9BQF6 1050 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 VTA1Q9NP79 307 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 DDX25Q9UHL0 483 aaKnown RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 CFAP45Q9UL16 551 aa10.35□□□□□ -0.75
SCARB2-225ENST00000640900 DDX49Q9Y6V7 483 aaKnown RBP10.35□□□□□ -0.75
SCARB2-225ENST00000640900 ELP1O95163 1332 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 FOXN1O15353 648 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 MSH4O15457 936 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 NEMFO60524 1076 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 CCNT1O60563 726 aaKnown RBP10.34□□□□□ -0.75
SCARB2-225ENST00000640900 PPP6R2O75170 966 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 PSMD10O75832 226 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 ZNF865P0CJ78 1059 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-225ENST00000640900 ARP10275 920 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 KCNA2P16389 499 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 HOXD10P28358 340 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 MCM7P33993 719 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 KRT85P78386 507 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 SPIRE1Q08AE8 756 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 PTGDRQ13258 359 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 ARHGEF6Q15052 776 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 CCL14Q16627 93 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 AXDND1Q5T1B0 1012 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-225ENST00000640900 OTOP1Q7RTM1 612 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 TRIB2Q92519 343 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 MPHOSPH6Q99547 160 aaKnown RBP10.34□□□□□ -0.75
SCARB2-225ENST00000640900 RIT2Q99578 217 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 WDR11Q9BZH6 1224 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 SCAND2PQ9GZW5 306 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-225ENST00000640900 ABHD16BQ9H3Z7 469 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 AGO4Q9HCK5 861 aaKnown RBP10.34□□□□□ -0.75
SCARB2-225ENST00000640900 KCNH7Q9NS40 1196 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-225ENST00000640900 TFIP11Q9UBB9 837 aaKnown RBP10.34□□□□□ -0.75
SCARB2-225ENST00000640900 TSKSQ9UJT2 592 aa10.34□□□□□ -0.75
SCARB2-225ENST00000640900 FBXO2Q9UK22 296 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-225ENST00000640900 FIBPO43427 364 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 CYP2B6P20813 491 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 NKX3-2P78367 333 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 SP2Q02086 613 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 PDE4DQ08499 809 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 ITGB3BPQ13352 177 aaPredicted RBP10.33□□□□□ -0.76
SCARB2-225ENST00000640900 PRR16Q569H4 304 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 KCNV1Q6PIU1 500 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 IGSF22Q8N9C0 903 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 ZNF579Q8NAF0 562 aaKnown RBP10.33□□□□□ -0.76
SCARB2-225ENST00000640900 CDHR1Q96JP9 859 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 DDX41Q9UJV9 622 aaKnown RBP10.33□□□□□ -0.76
SCARB2-225ENST00000640900 VAV3Q9UKW4 847 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 CEP131Q9UPN4 1083 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 CNPY2Q9Y2B0 182 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 SRPRBQ9Y5M8 271 aaKnown RBP10.33□□□□□ -0.76
SCARB2-225ENST00000640900 MRVI1Q9Y6F6 885 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 NFASCO94856 1347 aa10.33□□□□□ -0.76
SCARB2-225ENST00000640900 FAM237AA0A1B0GTK4 181 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 POTEFA5A3E0 1075 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 IPO5O00410 1097 aaKnown RBP10.32□□□□□ -0.76
SCARB2-225ENST00000640900 SPTLC2O15270 562 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 ATP9AO75110 1047 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 OR52Z1P0C646 297 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 HSPA1AP0DMV8 641 aaKnown RBP10.32□□□□□ -0.76
SCARB2-225ENST00000640900 HSPA1BP0DMV9 641 aaKnown RBP10.32□□□□□ -0.76
SCARB2-225ENST00000640900 MYCLP12524 364 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-225ENST00000640900 CYBAP13498 195 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 ATP2B1P20020 1258 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 CTCFP49711 727 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-225ENST00000640900 PPP2R5CQ13362 524 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 MTMR1Q13613 665 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 ACVR2BQ13705 512 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 NLRX1Q86UT6 975 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 SLFN12Q8IYM2 578 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 TRPV1Q8NER1 839 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 KCNG4Q8TDN1 519 aa10.32□□□□□ -0.76
SCARB2-225ENST00000640900 SCFD2Q8WU76 684 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms