RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PICALMQ13492 652 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 CENPUQ71F23 418 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 TAF1DQ9H5J8 278 aaPredicted RBP8.96□□□□□ -0.97
NECAP1-227ENST00000640648 USP40Q9NVE5 1235 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 VPS54Q9P1Q0 977 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 RCOR1Q9UKL0 485 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 HPCAL4Q9UM19 191 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 L1RE1Q9UN81 338 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 ZNF532Q9HCE3 1301 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 ADCY3O60266 1144 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 AP1G2O75843 785 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 LSP1P33241 339 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 RGS2P41220 211 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 NUP107P57740 925 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 AP1B1Q10567 949 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 DPCR1Q3MIW9 517 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 ZNF554Q86TJ5 538 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 CCDC89Q8N998 374 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 TRPC4APQ8TEL6 797 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 IL17RAQ96F46 866 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 NOC4LQ9BVI4 516 aaKnown RBP8.96□□□□□ -0.97
NECAP1-227ENST00000640648 UBAP1Q9NZ09 502 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 C6orf203Q9P0P8 240 aaPredicted RBP8.96□□□□□ -0.97
NECAP1-227ENST00000640648 TBX22Q9Y458 520 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 RPAP1Q9BWH6 1393 aaPredicted RBP8.96□□□□□ -0.98
NECAP1-227ENST00000640648 TTC37Q6PGP7 1564 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 SMIM31A0A1B0GVY4 71 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 PRAMEF22A3QJZ6 481 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 GOLGA8CPA6NN73 597 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 H7C1D1 291 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 FNTAP49354 379 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 PLCD1P51178 756 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 ITGA9Q13797 1035 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 BEND6Q5SZJ8 279 aaPredicted RBP8.96□□□□□ -0.98
NECAP1-227ENST00000640648 KIAA0825Q8IV33 1275 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 AFAP1L2Q8N4X5 818 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 PPP2R3CQ969Q6 453 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 NUDCD1Q96RS6 583 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 SIKE1Q9BRV8 207 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 TMOD2Q9NZR1 351 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 ZDHHC9Q9Y397 364 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 MAP2K7O14733 419 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 SERPINB3P29508 390 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 SERPINB10P48595 397 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 KRT6CP48668 564 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 MED21Q13503 144 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 PTGISQ16647 500 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 WASHC2DQ5SRD0 308 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 KRT79Q5XKE5 535 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 TMED8Q6PL24 325 aaPredicted RBP8.96□□□□□ -0.98
NECAP1-227ENST00000640648 PLEKHA4Q9H4M7 779 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 CD209Q9NNX6 404 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 TMOD4Q9NZQ9 345 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 MYOM2P54296 1465 aa8.96□□□□□ -0.98
NECAP1-227ENST00000640648 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 WFS1O76024 890 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 KRT13P13646 458 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 PDE4DQ08499 809 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 BYSLQ13895 437 aaKnown RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 PPP2R5BQ15173 497 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 LRRC24Q50LG9 513 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 TTC38Q5R3I4 469 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 PCNX4Q63HM2 1172 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 NCAPH2Q6IBW4 605 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 ANKRD23Q86SG2 305 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 CSGALNACT2Q8N6G5 542 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 IFIH1Q9BYX4 1025 aaKnown RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 C19orf44Q9H6X5 657 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 C6orf50Q9HD87 102 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 ATAD3AQ9NVI7 634 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 KRT8P05787 483 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 EPB41P11171 864 aaKnown RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 PDIA3P30101 505 aaKnown RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 PAK1Q13153 545 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 ARID5BQ14865 1188 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 ZNF274Q96GC6 653 aaPredicted RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 SH3GL2Q99962 352 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 ECT2Q9H8V3 914 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 CD248Q9HCU0 757 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 HAUS2Q9NVX0 235 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 NDE1Q9NXR1 346 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 ATP11BQ9Y2G3 1177 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 B4DLN1 442 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 PDLIM1O00151 329 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 NPTXRO95502 500 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 FGAP02671 866 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 VDRP11473 427 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 DCTN2Q13561 401 aaKnown RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 R3HDM1Q15032 1099 aaKnown RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 NAA35Q5VZE5 725 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 BZW1Q7L1Q6 419 aaKnown RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 HORMAD1Q86X24 394 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 SNRNP27Q8WVK2 155 aaKnown RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 CAAP1Q9H8G2 361 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 PPCSQ9HAB8 311 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 BTBD18B2RXH4 712 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 CHMP2AO43633 222 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 DKC1O60832 514 aaKnown RBP eCLIP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 ATP6V1G2O95670 118 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms