RNA–Protein interactions for RNA: ENST00000638873.1

SPIN3-215, Transcript of spindlin family member 3, humanhuman

TSL 2

Gene SPIN3, Length 3,221 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-215ENST00000638873 ACTR5Q9H9F9 607 aaPredicted RBP13.55□□□□□ -0.24
SPIN3-215ENST00000638873 LUC7LQ9NQ29 371 aaKnown RBP13.55□□□□□ -0.24
SPIN3-215ENST00000638873 PPANQ9NQ55 473 aaKnown RBP13.55□□□□□ -0.24
SPIN3-215ENST00000638873 USP17L12C9JPN9 530 aa13.55□□□□□ -0.24
SPIN3-215ENST00000638873 USP17L21D6R901 530 aa13.55□□□□□ -0.24
SPIN3-215ENST00000638873 FGFR1OPO95684 399 aaKnown RBP13.55□□□□□ -0.24
SPIN3-215ENST00000638873 IGHMBP2P38935 993 aaKnown RBP13.55□□□□□ -0.24
SPIN3-215ENST00000638873 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
SPIN3-215ENST00000638873 SSU72P8A0A1W2PR75 194 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 RASSF9O75901 435 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 APBA3O96018 575 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 PRPHP41219 470 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 PSEN1P49768 467 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 PDXDC1Q6P996 788 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 CYFIP2Q96F07 1278 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 AK8Q96MA6 479 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 SEMA6BQ9H3T3 888 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 SLC40A1Q9NP59 571 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 SUFUQ9UMX1 484 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 TNNC1P63316 161 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 MSL1Q68DK7 614 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 TMBIM4Q9HC24 238 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 SLC39A2Q9NP94 309 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 GCOM1H8Y6P7 765 aaPredicted RBP13.54□□□□□ -0.24
SPIN3-215ENST00000638873 ORC4O43929 436 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 PALMO75781 387 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 MYZAPP0CAP1 466 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 NF2P35240 595 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 HSPA9P38646 679 aaKnown RBP13.54□□□□□ -0.24
SPIN3-215ENST00000638873 HLTFQ14527 1009 aaKnown RBP eCLIP13.54□□□□□ -0.24
SPIN3-215ENST00000638873 CDC37Q16543 378 aaPredicted RBP13.54□□□□□ -0.24
SPIN3-215ENST00000638873 PREPLQ4J6C6 727 aaPredicted RBP13.54□□□□□ -0.24
SPIN3-215ENST00000638873 C6orf89Q6UWU4 347 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 BAP1Q92560 729 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 PCDHA6Q9UN73 950 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
SPIN3-215ENST00000638873 PCDHA8Q9Y5H6 950 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 NRAPQ86VF7 1730 aa13.54□□□□□ -0.24
SPIN3-215ENST00000638873 NTSR2O95665 410 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 FTCDO95954 541 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 ASTE1Q2TB18 679 aaPredicted RBP13.53□□□□□ -0.24
SPIN3-215ENST00000638873 COBLL1Q53SF7 1204 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 CENPPQ6IPU0 288 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 LRIG3Q6UXM1 1119 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 TMC4Q7Z404 712 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 KIAA0895Q8NCT3 520 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 HPS3Q969F9 1004 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 FLT1P17948 1338 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 C21orf2O43822 256 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 SLC9C1Q4G0N8 1177 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 CELF1Q92879 486 aaKnown RBP13.53□□□□□ -0.24
SPIN3-215ENST00000638873 TANGO6Q9C0B7 1094 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 PLCB1Q9NQ66 1216 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 MCM8Q9UJA3 840 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 BAZ2AQ9UIF9 1905 aaKnown RBP13.53□□□□□ -0.24
SPIN3-215ENST00000638873 DLEC1Q9Y238 1755 aa13.53□□□□□ -0.24
SPIN3-215ENST00000638873 GMNCA6NCL1 334 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 TSPY2A6NKD2 308 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 RPS6KA4O75676 772 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 RNASE9P60153 205 aaKnown RBP13.52□□□□□ -0.24
SPIN3-215ENST00000638873 ATP2B2Q01814 1243 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 SNCBQ16143 134 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 CCDC152Q4G0S7 254 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 C3orf20Q8ND61 904 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.52□□□□□ -0.24
SPIN3-215ENST00000638873 EDEM3Q9BZQ6 932 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 TAF1DQ9H5J8 278 aaPredicted RBP13.52□□□□□ -0.24
SPIN3-215ENST00000638873 TFCP2L1Q9NZI6 479 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 ABCB11O95342 1321 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 M0R2N6 131 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 RAD51CO43502 376 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 OR52Z1P0C646 297 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 ELF1P32519 619 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 CCDC50Q8IVM0 306 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 KLHL7Q8IXQ5 586 aa13.52□□□□□ -0.24
SPIN3-215ENST00000638873 GPR101Q96P66 508 aaPredicted RBP13.52□□□□□ -0.24
SPIN3-215ENST00000638873 CHRNDQ07001 517 aa13.52□□□□□ -0.25
SPIN3-215ENST00000638873 GALNT17Q6IS24 598 aa13.52□□□□□ -0.25
SPIN3-215ENST00000638873 LRRC45Q96CN5 670 aa13.52□□□□□ -0.25
SPIN3-215ENST00000638873 ODF2LQ9ULJ1 636 aa13.52□□□□□ -0.25
SPIN3-215ENST00000638873 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 RBAK-RBAKDNI3L0D1 243 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 EHHADHQ08426 723 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 TRADDQ15628 312 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 NAB2Q15742 525 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 HGSNATQ68CP4 663 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 HEATR3Q7Z4Q2 680 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 TAF4BQ92750 862 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 CALML4Q96GE6 196 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 NUCKS1Q9H1E3 243 aaKnown RBP13.51□□□□□ -0.25
SPIN3-215ENST00000638873 NLRC4Q9NPP4 1024 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 DDX20Q9UHI6 824 aaKnown RBP13.51□□□□□ -0.25
SPIN3-215ENST00000638873 GYG1P46976 350 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 ODF2Q5BJF6 829 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 MEI1Q5TIA1 1274 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 SFMBT2Q5VUG0 894 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 RUFY4Q6ZNE9 571 aa13.51□□□□□ -0.25
SPIN3-215ENST00000638873 CEP57Q86XR8 500 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms