RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 C1orf53Q5VUE5 145 aa24.93■■□□□ 1.58
SCN1B-206ENST00000638536 MYSM1Q5VVJ2 828 aa24.93■■□□□ 1.58
SCN1B-206ENST00000638536 CCDC12Q8WUD4 166 aaPredicted RBP24.93■■□□□ 1.58
SCN1B-206ENST00000638536 NR2E3Q9Y5X4 410 aa24.93■■□□□ 1.58
SCN1B-206ENST00000638536 UBIAD1Q9Y5Z9 338 aa24.93■■□□□ 1.58
SCN1B-206ENST00000638536 ELP1O95163 1332 aa24.92■■□□□ 1.58
SCN1B-206ENST00000638536 JAK2O60674 1132 aa24.92■■□□□ 1.58
SCN1B-206ENST00000638536 STAM2O75886 525 aa24.92■■□□□ 1.58
SCN1B-206ENST00000638536 GGPS1O95749 300 aa24.92■■□□□ 1.58
SCN1B-206ENST00000638536 FOSP01100 380 aaPredicted RBP24.92■■□□□ 1.58
SCN1B-206ENST00000638536 CPT1AP50416 773 aa24.92■■□□□ 1.58
SCN1B-206ENST00000638536 CELF3Q5SZQ8 465 aaKnown RBP24.92■■□□□ 1.58
SCN1B-206ENST00000638536 XRRA1Q6P2D8 792 aa24.92■■□□□ 1.58
SCN1B-206ENST00000638536 DHX37Q8IY37 1157 aaKnown RBP24.92■■□□□ 1.58
SCN1B-206ENST00000638536 NSUN7Q8NE18 718 aaKnown RBP24.92■■□□□ 1.58
SCN1B-206ENST00000638536 UPF2Q9HAU5 1272 aaKnown RBP24.92■■□□□ 1.58
SCN1B-206ENST00000638536 SH3GLB2Q9NR46 395 aa24.92■■□□□ 1.58
SCN1B-206ENST00000638536 ATP9AO75110 1047 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 CDKL5O76039 1030 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 CD2BP2O95400 341 aaKnown RBP24.91■■□□□ 1.58
SCN1B-206ENST00000638536 MMP3P08254 477 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 TGFB3P10600 412 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 CDK7P50613 346 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 NLRP5P59047 1200 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 AP3B2Q13367 1082 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 HSDL1Q3SXM5 330 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 GNPTABQ3T906 1256 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 SH3RF1Q7Z6J0 888 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 REXO1Q8N1G1 1221 aaKnown RBP24.91■■□□□ 1.58
SCN1B-206ENST00000638536 CCDC148Q8NFR7 591 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 CRYGNQ8WXF5 182 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 EMID1Q96A84 441 aaPredicted RBP24.91■■□□□ 1.58
SCN1B-206ENST00000638536 GLT8D2Q9H1C3 349 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 KCNJ14Q9UNX9 436 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 STK36Q9NRP7 1315 aa24.91■■□□□ 1.58
SCN1B-206ENST00000638536 FIBPO43427 364 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 EDIL3O43854 480 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 ZEB2O60315 1214 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 PQBP1O60828 265 aaKnown RBP24.9■■□□□ 1.58
SCN1B-206ENST00000638536 GNA11P29992 359 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 SREBF1P36956 1147 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 KCNV1Q6PIU1 500 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 ORC3Q9UBD5 711 aaPredicted RBP24.9■■□□□ 1.58
SCN1B-206ENST00000638536 LAMA2P24043 3122 aaKnown RBP24.9■■□□□ 1.58
SCN1B-206ENST00000638536 TRIOBPQ9H2D6 2365 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 RABEP1Q15276 862 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 TEX2Q8IWB9 1127 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 CCDC83Q8IWF9 413 aa24.9■■□□□ 1.58
SCN1B-206ENST00000638536 ARVCFO00192 962 aa24.89■■□□□ 1.57
SCN1B-206ENST00000638536 ARHGAP4P98171 946 aa24.89■■□□□ 1.57
SCN1B-206ENST00000638536 LAMC2Q13753 1193 aa24.89■■□□□ 1.57
SCN1B-206ENST00000638536 CYFIP1Q7L576 1253 aa24.89■■□□□ 1.57
SCN1B-206ENST00000638536 JADE2Q9NQC1 790 aa24.89■■□□□ 1.57
SCN1B-206ENST00000638536 A0A0U1RQG5 324 aaPredicted RBP24.88■■□□□ 1.57
SCN1B-206ENST00000638536 M0R2N6 131 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 ITGA7Q13683 1181 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 NLRX1Q86UT6 975 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 SLC43A3Q8NBI5 491 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 PPTC7Q8NI37 304 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 KAT2BQ92831 832 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 GPRASP2Q96D09 838 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 SPATA33Q96N06 139 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 MXRA8Q9BRK3 442 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 EHMT1Q9H9B1 1298 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 PDLIM7Q9NR12 457 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 POLR3EQ9NVU0 708 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 PKD2L1Q9P0L9 805 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 PCDHA4Q9UN74 947 aa24.88■■□□□ 1.57
SCN1B-206ENST00000638536 CABYRO75952 493 aa24.87■■□□□ 1.57
SCN1B-206ENST00000638536 ARP10275 920 aa24.87■■□□□ 1.57
SCN1B-206ENST00000638536 KCNA2P16389 499 aa24.87■■□□□ 1.57
SCN1B-206ENST00000638536 FAAP100Q0VG06 881 aa24.87■■□□□ 1.57
SCN1B-206ENST00000638536 ANKRD33Q7Z3H0 272 aa24.87■■□□□ 1.57
SCN1B-206ENST00000638536 MLXIPQ9HAP2 919 aa24.87■■□□□ 1.57
SCN1B-206ENST00000638536 TRIP12Q14669 1992 aaPredicted RBP24.87■■□□□ 1.57
SCN1B-206ENST00000638536 TRIM43BA6NCK2 446 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 FAM86B1E9PN63 330 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 FAM86B2P0C5J1 330 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 ITGB8P26012 769 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 MTMR1Q13613 665 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 BRDTQ58F21 947 aaPredicted RBP24.86■■□□□ 1.57
SCN1B-206ENST00000638536 TRIM43Q96BQ3 446 aaPredicted RBP24.86■■□□□ 1.57
SCN1B-206ENST00000638536 MTG1Q9BT17 334 aaPredicted RBP24.86■■□□□ 1.57
SCN1B-206ENST00000638536 ALG1Q9BT22 464 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 PHF20Q9BVI0 1012 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 LTBP2Q14767 1821 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 ZNF286BP0CG31 522 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 CEP55Q53EZ4 464 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 BLIDQ8IZY5 108 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 BICD2Q8TD16 824 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 UIMC1Q96RL1 719 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 PRDM5Q9NQX1 630 aaPredicted RBP24.86■■□□□ 1.57
SCN1B-206ENST00000638536 KCNH7Q9NS40 1196 aa24.86■■□□□ 1.57
SCN1B-206ENST00000638536 NEDD9Q14511 834 aa24.85■■□□□ 1.57
SCN1B-206ENST00000638536 NBPF20Q3BBV1 942 aa24.85■■□□□ 1.57
SCN1B-206ENST00000638536 FAM126BQ8IXS8 530 aa24.85■■□□□ 1.57
SCN1B-206ENST00000638536 OXER1Q8TDS5 423 aa24.85■■□□□ 1.57
SCN1B-206ENST00000638536 SENP7Q9BQF6 1050 aa24.85■■□□□ 1.57
SCN1B-206ENST00000638536 MEIS1O00470 390 aa24.84■■□□□ 1.57
SCN1B-206ENST00000638536 CYP3A4P08684 503 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms