RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PPTC7Q8NI37 304 aa20.42■□□□□ 0.86
PNKP-230ENST00000638016 ALG1Q9BT22 464 aa20.42■□□□□ 0.86
PNKP-230ENST00000638016 TTYH1Q9H313 450 aaPredicted RBP20.42■□□□□ 0.86
PNKP-230ENST00000638016 IL23AQ9NPF7 189 aa20.42■□□□□ 0.86
PNKP-230ENST00000638016 CXXC1Q9P0U4 656 aaPredicted RBP20.42■□□□□ 0.86
PNKP-230ENST00000638016 TET1Q8NFU7 2136 aa20.42■□□□□ 0.86
PNKP-230ENST00000638016 PIK3CDO00329 1044 aa20.41■□□□□ 0.86
PNKP-230ENST00000638016 CASTP20810 708 aaKnown RBP20.41■□□□□ 0.86
PNKP-230ENST00000638016 SMAD3P84022 425 aaKnown RBP20.41■□□□□ 0.86
PNKP-230ENST00000638016 LAMC2Q13753 1193 aa20.41■□□□□ 0.86
PNKP-230ENST00000638016 DGKDQ16760 1214 aa20.41■□□□□ 0.86
PNKP-230ENST00000638016 Q6ZUG5 572 aa20.41■□□□□ 0.86
PNKP-230ENST00000638016 CUL5Q93034 780 aa20.41■□□□□ 0.86
PNKP-230ENST00000638016 SPATA33Q96N06 139 aa20.41■□□□□ 0.86
PNKP-230ENST00000638016 INPP4AQ96PE3 977 aaPredicted RBP20.41■□□□□ 0.86
PNKP-230ENST00000638016 SEZ6LQ9BYH1 1024 aa20.41■□□□□ 0.86
PNKP-230ENST00000638016 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
PNKP-230ENST00000638016 F2P00734 622 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 PSEN2P49810 448 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 HIC1Q14526 733 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 ZNF697Q5TEC3 545 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 RASIP1Q5U651 963 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 OTOP2Q7RTS6 562 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 GBF1Q92538 1859 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 BRF1Q92994 677 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 PGBD1Q96JS3 809 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 HDAC6Q9UBN7 1215 aa20.4■□□□□ 0.86
PNKP-230ENST00000638016 PPFIA3O75145 1194 aa20.39■□□□□ 0.85
PNKP-230ENST00000638016 SUPT20HL2P0C7V6 817 aa20.39■□□□□ 0.85
PNKP-230ENST00000638016 HOXD8P13378 290 aaPredicted RBP20.39■□□□□ 0.85
PNKP-230ENST00000638016 ADD1P35611 737 aaKnown RBP20.39■□□□□ 0.85
PNKP-230ENST00000638016 PBX2P40425 430 aa20.39■□□□□ 0.85
PNKP-230ENST00000638016 ZNF200P98182 395 aaPredicted RBP20.39■□□□□ 0.85
PNKP-230ENST00000638016 MFSD10Q14728 455 aa20.39■□□□□ 0.85
PNKP-230ENST00000638016 PTGISQ16647 500 aa20.39■□□□□ 0.85
PNKP-230ENST00000638016 PCNX4Q63HM2 1172 aa20.39■□□□□ 0.85
PNKP-230ENST00000638016 PSRC1Q6PGN9 363 aaPredicted RBP20.39■□□□□ 0.85
PNKP-230ENST00000638016 DEFB128Q7Z7B8 93 aa20.39■□□□□ 0.85
PNKP-230ENST00000638016 DHX38Q92620 1227 aaKnown RBP20.39■□□□□ 0.85
PNKP-230ENST00000638016 RBM28Q9NW13 759 aaKnown RBP20.39■□□□□ 0.85
PNKP-230ENST00000638016 V9GY48 417 aaPredicted RBP20.39■□□□□ 0.85
PNKP-230ENST00000638016 SPATA31C2B4DYI2 1134 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 HAS3O00219 553 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 ICAM3P32942 547 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 FGD1P98174 961 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 SP4Q02446 784 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 KIAA0753Q2KHM9 967 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 BLOC1S2Q6QNY1 142 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 WNT8BQ93098 351 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 MLXIPQ9HAP2 919 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 GTF2IRD1Q9UHL9 959 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 NOD1Q9Y239 953 aa20.38■□□□□ 0.85
PNKP-230ENST00000638016 ADAMTS3O15072 1205 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 REC8O95072 547 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 HMGB1P09429 215 aaKnown RBP20.37■□□□□ 0.85
PNKP-230ENST00000638016 RPS6KB1P23443 525 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 NAPAP54920 295 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 PTPN11Q06124 597 aaPredicted RBP20.37■□□□□ 0.85
PNKP-230ENST00000638016 GNPTABQ3T906 1256 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 KCNV1Q6PIU1 500 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 CYFIP1Q7L576 1253 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 SESTD1Q86VW0 696 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 TRIM50Q86XT4 487 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 HERVK_113Q902F9 699 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 C16orf70Q9BSU1 422 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 SEMA6BQ9H3T3 888 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 PPP4R2Q9NY27 417 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 PKD2L1Q9P0L9 805 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 PCDHA6Q9UN73 950 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 PCDHA8Q9Y5H6 950 aa20.37■□□□□ 0.85
PNKP-230ENST00000638016 MYO9BQ13459 2157 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 EYSQ5T1H1 3165 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.36■□□□□ 0.85
PNKP-230ENST00000638016 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.36■□□□□ 0.85
PNKP-230ENST00000638016 STXBP3O00186 592 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 FIBPO43427 364 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 ATP9AO75110 1047 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 FGBP02675 491 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 TGFB3P10600 412 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 ITGB5P18084 799 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 DNAJB2P25686 324 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 METAP2P50579 478 aaKnown RBP eCLIP20.36■□□□□ 0.85
PNKP-230ENST00000638016 PBX4Q9BYU1 374 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 TMEM260Q9NX78 707 aa20.36■□□□□ 0.85
PNKP-230ENST00000638016 LGALS2P05162 132 aa20.35■□□□□ 0.85
PNKP-230ENST00000638016 IQCF3P0C7M6 154 aa20.35■□□□□ 0.85
PNKP-230ENST00000638016 C7orf31Q8N865 590 aa20.35■□□□□ 0.85
PNKP-230ENST00000638016 CDX2Q99626 313 aaPredicted RBP20.35■□□□□ 0.85
PNKP-230ENST00000638016 GPR20Q99678 358 aa20.35■□□□□ 0.85
PNKP-230ENST00000638016 LARP6Q9BRS8 491 aaKnown RBP20.35■□□□□ 0.85
PNKP-230ENST00000638016 STXBP5LQ9Y2K9 1186 aa20.35■□□□□ 0.85
PNKP-230ENST00000638016 PPFIA4O75335 1185 aa20.34■□□□□ 0.85
PNKP-230ENST00000638016 STAM2O75886 525 aa20.34■□□□□ 0.85
PNKP-230ENST00000638016 GPNMBQ14956 572 aa20.34■□□□□ 0.85
PNKP-230ENST00000638016 METTL7BQ6UX53 244 aa20.34■□□□□ 0.85
PNKP-230ENST00000638016 MYLIPQ8WY64 445 aa20.34■□□□□ 0.85
PNKP-230ENST00000638016 KATNAL1Q9BW62 490 aa20.34■□□□□ 0.85
PNKP-230ENST00000638016 USP26Q9BXU7 913 aa20.34■□□□□ 0.85
PNKP-230ENST00000638016 SPDYE3A6NKU9 549 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 ZBBXA8MT70 800 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms