RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 GLIS3Q8NEA6 775 aa20.88■□□□□ 0.93
CLN5-219ENST00000637537 MBOAT7Q96N66 472 aa20.88■□□□□ 0.93
CLN5-219ENST00000637537 NAP1L4Q99733 375 aaKnown RBP20.88■□□□□ 0.93
CLN5-219ENST00000637537 LIMA1Q9UHB6 759 aaKnown RBP20.88■□□□□ 0.93
CLN5-219ENST00000637537 H7C1D1 291 aa20.88■□□□□ 0.93
CLN5-219ENST00000637537 FOSP01100 380 aaPredicted RBP20.88■□□□□ 0.93
CLN5-219ENST00000637537 PBX1P40424 430 aa20.88■□□□□ 0.93
CLN5-219ENST00000637537 COPB1P53618 953 aaKnown RBP20.88■□□□□ 0.93
CLN5-219ENST00000637537 RBL2Q08999 1139 aa20.88■□□□□ 0.93
CLN5-219ENST00000637537 TNFAIP1Q13829 316 aa20.88■□□□□ 0.93
CLN5-219ENST00000637537 NBPF12Q5TAG4 269 aaPredicted RBP20.88■□□□□ 0.93
CLN5-219ENST00000637537 CCDC47Q96A33 483 aaKnown RBP20.88■□□□□ 0.93
CLN5-219ENST00000637537 L2HGDHQ9H9P8 463 aa20.88■□□□□ 0.93
CLN5-219ENST00000637537 FZD9O00144 591 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 NRDCO43847 1150 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 MED24O75448 989 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 RPS12P25398 132 aaKnown RBP20.87■□□□□ 0.93
CLN5-219ENST00000637537 RAD51AP2Q09MP3 1159 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 AGBL1Q96MI9 1066 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 DUSP9Q99956 384 aaKnown RBP20.87■□□□□ 0.93
CLN5-219ENST00000637537 SH2D4AQ9H788 454 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 ATAD5Q96QE3 1844 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 POTEFA5A3E0 1075 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 LRRC10BA6NIK2 292 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 MSH4O15457 936 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 POTEIP0CG38 1075 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 ZNF76P36508 570 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 CACNB1Q02641 598 aaPredicted RBP20.87■□□□□ 0.93
CLN5-219ENST00000637537 SPIRE1Q08AE8 756 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 NCAPH2Q6IBW4 605 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 POTEGQ6S5H5 508 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 POTEEQ6S8J3 1075 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 PPP1R13BQ96KQ4 1090 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 FHOD1Q9Y613 1164 aa20.87■□□□□ 0.93
CLN5-219ENST00000637537 KIF4BQ2VIQ3 1234 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 CNNM4Q6P4Q7 775 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 LDHDQ86WU2 507 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 SLFN12Q8IYM2 578 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 CSGALNACT2Q8N6G5 542 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 P2RX5Q93086 422 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 BAG1Q99933 345 aaPredicted RBP20.86■□□□□ 0.93
CLN5-219ENST00000637537 NPHP3-ACAD11A0A0J9YXS1 232 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 PIK3CDO00329 1044 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 MEIS1O00470 390 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 PES1O00541 588 aaKnown RBP20.86■□□□□ 0.93
CLN5-219ENST00000637537 NKRFO15226 690 aaKnown RBP eCLIP20.86■□□□□ 0.93
CLN5-219ENST00000637537 Q4G0T1 1027 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 MOXD1Q6UVY6 613 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 UNC13DQ70J99 1090 aa20.86■□□□□ 0.93
CLN5-219ENST00000637537 DHTKD1Q96HY7 919 aaPredicted RBP20.86■□□□□ 0.93
CLN5-219ENST00000637537 LRRC41Q15345 812 aa20.85■□□□□ 0.93
CLN5-219ENST00000637537 FEM1BQ9UK73 627 aa20.85■□□□□ 0.93
CLN5-219ENST00000637537 GCOM1H8Y6P7 765 aaPredicted RBP20.85■□□□□ 0.93
CLN5-219ENST00000637537 POLR2MP0CAP2 368 aa20.85■□□□□ 0.93
CLN5-219ENST00000637537 CCNE1P24864 410 aa20.85■□□□□ 0.93
CLN5-219ENST00000637537 CASP14P31944 242 aa20.85■□□□□ 0.93
CLN5-219ENST00000637537 SPAG1Q07617 926 aa20.85■□□□□ 0.93
CLN5-219ENST00000637537 CATSPER3Q86XQ3 398 aa20.85■□□□□ 0.93
CLN5-219ENST00000637537 SEMA6BQ9H3T3 888 aa20.85■□□□□ 0.93
CLN5-219ENST00000637537 PSMC6P62333 389 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 CYP4A11Q02928 519 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 ANKRD20A12PQ8NF67 263 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 TSPYL1Q9H0U9 437 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.84■□□□□ 0.93
CLN5-219ENST00000637537 TBC1D7Q9P0N9 293 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 AKR1B15C9JRZ8 316 aaPredicted RBP20.84■□□□□ 0.93
CLN5-219ENST00000637537 GYPCP04921 128 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 FXR1P51114 621 aaKnown RBP eCLIP20.84■□□□□ 0.93
CLN5-219ENST00000637537 UBXN1Q04323 297 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 FAM160B2Q86V87 743 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 PPFIBP1Q86W92 1011 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 CPXCR1Q8N123 301 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 DNAJC19Q96DA6 116 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 WDR18Q9BV38 432 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 NT5C3AQ9H0P0 336 aa20.84■□□□□ 0.93
CLN5-219ENST00000637537 RNF225M0QZC1 329 aaPredicted RBP20.83■□□□□ 0.93
CLN5-219ENST00000637537 PLA2G4BP0C869 781 aa20.83■□□□□ 0.93
CLN5-219ENST00000637537 CIITAP33076 1130 aa20.83■□□□□ 0.93
CLN5-219ENST00000637537 HNRNPH2P55795 449 aaKnown RBP20.83■□□□□ 0.93
CLN5-219ENST00000637537 MTMR2Q13614 643 aa20.83■□□□□ 0.93
CLN5-219ENST00000637537 HYIQ5T013 277 aa20.83■□□□□ 0.93
CLN5-219ENST00000637537 MCTP2Q6DN12 878 aa20.83■□□□□ 0.93
CLN5-219ENST00000637537 ZKSCAN4Q969J2 545 aaPredicted RBP20.83■□□□□ 0.93
CLN5-219ENST00000637537 LTBP3Q9NS15 1303 aa20.83■□□□□ 0.93
CLN5-219ENST00000637537 KDM3AQ9Y4C1 1321 aa20.83■□□□□ 0.93
CLN5-219ENST00000637537 IGLV3-22A0A075B6J6 115 aa20.83■□□□□ 0.92
CLN5-219ENST00000637537 PVALEFA0A1B0GWK0 134 aa20.83■□□□□ 0.92
CLN5-219ENST00000637537 ERCC3P19447 782 aa20.83■□□□□ 0.92
CLN5-219ENST00000637537 MTF1Q14872 753 aa20.83■□□□□ 0.92
CLN5-219ENST00000637537 ANGEL2Q5VTE6 544 aaKnown RBP20.83■□□□□ 0.92
CLN5-219ENST00000637537 FGFBP2Q9BYJ0 223 aa20.83■□□□□ 0.92
CLN5-219ENST00000637537 TANGO6Q9C0B7 1094 aa20.83■□□□□ 0.92
CLN5-219ENST00000637537 ZNF536O15090 1300 aa20.83■□□□□ 0.92
CLN5-219ENST00000637537 SEMA3FQ13275 785 aa20.82■□□□□ 0.92
CLN5-219ENST00000637537 ERCC6LQ2NKX8 1250 aa20.82■□□□□ 0.92
CLN5-219ENST00000637537 TOGARAM2Q6ZUX3 1019 aa20.82■□□□□ 0.92
CLN5-219ENST00000637537 TRPM4Q8TD43 1214 aa20.82■□□□□ 0.92
CLN5-219ENST00000637537 THAP9Q9H5L6 903 aa20.82■□□□□ 0.92
CLN5-219ENST00000637537 HOMER2Q9NSB8 354 aa20.82■□□□□ 0.92
CLN5-219ENST00000637537 CCPG1Q9ULG6 757 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms