RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 ARP10275 920 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 TPD52L1Q16890 204 aaPredicted RBP24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 LRRC8AQ8IWT6 810 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 KIAA0895Q8NCT3 520 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 C12orf42Q96LP6 360 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 CBFA2T2O43439 604 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 IDEP14735 1019 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 CACNB1Q02641 598 aaPredicted RBP24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 CEP55Q53EZ4 464 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 APTXQ7Z2E3 356 aaKnown RBP24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 TRERF1Q96PN7 1200 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 SLC39A2Q9NP94 309 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 OTOFQ9HC10 1997 aa24.23■■□□□ 1.47
CHRNA7-228ENST00000637519 RLFQ13129 1914 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 NPHP3-ACAD11A0A0J9YXS1 232 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 SPATA31C1P0DKV0 1188 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 PSMC6P62333 389 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 SYTL5Q8TDW5 730 aaPredicted RBP24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 PKD2L1Q9P0L9 805 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 RPS6P62753 249 aaKnown RBP24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 GOLGA8FQ08AF8 430 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 RAD51AP2Q09MP3 1159 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 GOLGA8DPQ0D2H9 430 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 NSMFQ6X4W1 530 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 REPS2Q8NFH8 660 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 EEF2KMTQ96G04 330 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 NT5C3AQ9H0P0 336 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 EHMT1Q9H9B1 1298 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 RGL1Q9NZL6 768 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 TMOD4Q9NZQ9 345 aa24.22■■□□□ 1.47
CHRNA7-228ENST00000637519 COL11A1P12107 1806 aaPredicted RBP24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 C19orf81C9J6K1 198 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 PLA2G4BP0C869 781 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 ITGB5P18084 799 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 LRCH2Q5VUJ6 765 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 HAUS3Q68CZ6 603 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 ARMCX5Q6P1M9 558 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 CREBRFQ8IUR6 639 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 VSTM4Q8IW00 320 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 TAAR1Q96RJ0 339 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 WDR90Q96KV7 1748 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 RPTORQ8N122 1335 aa24.21■■□□□ 1.47
CHRNA7-228ENST00000637519 PEX10O60683 326 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 EIF2AK2P19525 551 aaKnown RBP24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 EPHX2P34913 555 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 MAP3K9P80192 1104 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 GPR162Q16538 588 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 SNRNP48Q6IEG0 339 aaKnown RBP24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 DPY19L2Q6NUT2 758 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 UNC13DQ70J99 1090 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 MCF2L2Q86YR7 1114 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 GLIS3Q8NEA6 775 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 KIAA1524Q8TCG1 905 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 CLMNQ96JQ2 1002 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 RNF146Q9NTX7 359 aa24.2■■□□□ 1.47
CHRNA7-228ENST00000637519 TEX33O43247 280 aa24.2■■□□□ 1.46
CHRNA7-228ENST00000637519 DSG3P32926 999 aa24.2■■□□□ 1.46
CHRNA7-228ENST00000637519 TMEM132BQ14DG7 1078 aa24.2■■□□□ 1.46
CHRNA7-228ENST00000637519 TREML2Q5T2D2 321 aa24.2■■□□□ 1.46
CHRNA7-228ENST00000637519 TEX2Q8IWB9 1127 aa24.2■■□□□ 1.46
CHRNA7-228ENST00000637519 CCDC47Q96A33 483 aaKnown RBP24.2■■□□□ 1.46
CHRNA7-228ENST00000637519 PAPPA2Q9BXP8 1791 aa24.2■■□□□ 1.46
CHRNA7-228ENST00000637519 PSMD10O75832 226 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 CATSPERGQ6ZRH7 1159 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 OTOP1Q7RTM1 612 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 SLC5A5Q92911 643 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 DNAJC19Q96DA6 116 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 EIF2AK1Q9BQI3 630 aaKnown RBP24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 ZNF577Q9BSK1 485 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 WDR11Q9BZH6 1224 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 ELP3Q9H9T3 547 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 IMPACTQ9P2X3 320 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 ZNF214Q9UL59 606 aaPredicted RBP24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 DDX39AO00148 427 aaKnown RBP24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 RPA1P27694 616 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 PABPC4Q13310 644 aaKnown RBP eCLIP24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 EAPPQ56P03 285 aaPredicted RBP24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 GPBP1Q86WP2 473 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 ERMNQ8TAM6 284 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 CDCA5Q96FF9 252 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 MXRA8Q9BRK3 442 aa24.19■■□□□ 1.46
CHRNA7-228ENST00000637519 PSMA7O14818 248 aa24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 PPP1R12BO60237 982 aaPredicted RBP24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 GAS7O60861 476 aa24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 CCZ1BP86790 482 aa24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 CCZ1P86791 482 aaPredicted RBP24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 STIM1Q13586 685 aa24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 CTTNQ14247 550 aaKnown RBP24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 COG2Q14746 738 aa24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 CNNM4Q6P4Q7 775 aa24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 L3MBTL3Q96JM7 780 aaPredicted RBP24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 TRIM47Q96LD4 638 aa24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 CSADQ9Y600 493 aa24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 RBBP6Q7Z6E9 1792 aaKnown RBP24.18■■□□□ 1.46
CHRNA7-228ENST00000637519 A0A1B0GTH6 734 aa24.17■■□□□ 1.46
CHRNA7-228ENST00000637519 SPDYE16A6NNV3 312 aaPredicted RBP24.17■■□□□ 1.46
CHRNA7-228ENST00000637519 MRPS9P82933 396 aaKnown RBP24.17■■□□□ 1.46
CHRNA7-228ENST00000637519 GHRHRQ02643 423 aa24.17■■□□□ 1.46
CHRNA7-228ENST00000637519 LRRC41Q15345 812 aa24.17■■□□□ 1.46
CHRNA7-228ENST00000637519 TTI2Q6NXR4 508 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms