RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-223ENST00000637033 BCL9LQ86UU0 1499 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 EP400Q96L91 3159 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 MEIS1O00470 390 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 COPB2P35606 906 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 LLGL1Q15334 1064 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 FAM83BQ5T0W9 1011 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 DGKHQ86XP1 1220 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 CASKIN2Q8WXE0 1202 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 BAP1Q92560 729 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 TSGA10Q9BZW7 698 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 TMOD1P28289 359 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 STAT3P40763 770 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 EPHB4P54760 987 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 MAN2A1Q16706 1144 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 CFAP221Q4G0U5 840 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 TCERG1LQ5VWI1 586 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 TTBK2Q6IQ55 1244 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 EFCAB13Q8IY85 973 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 FNBP4Q8N3X1 1017 aaPredicted RBP14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 MMGT1Q8N4V1 131 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 C7orf25Q9BPX7 421 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 ZNF652Q9Y2D9 606 aa14.38□□□□□ -0.11
CHRNA7-223ENST00000637033 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 E7EVH7 732 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 RAD51CO43502 376 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 CEP104O60308 925 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 KRT18P05783 430 aaKnown RBP14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 IFT88Q13099 833 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 ODF2Q5BJF6 829 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 CENPPQ6IPU0 288 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 A0A087WUV0 522 aaPredicted RBP14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 SMIM23A6NLE4 172 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 OPA1O60313 960 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 TCP1P17987 556 aaKnown RBP14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 CDK8P49336 464 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 HERC4Q5GLZ8 1057 aaPredicted RBP14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 AMIGO3Q86WK7 504 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 RETREG2Q8NC44 543 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 DDX47Q9H0S4 455 aaKnown RBP14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 MYH3P11055 1940 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 KLHL30Q0D2K2 578 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 DCAF17Q5H9S7 520 aaPredicted RBP14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 SFMBT2Q5VUG0 894 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 PDXDC1Q6P996 788 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 GJB7Q6PEY0 223 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 SAMD1Q6SPF0 538 aaPredicted RBP14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 OTUD6BQ8N6M0 293 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 NOC3LQ8WTT2 800 aaKnown RBP14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 SETDB2Q96T68 719 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 LRRC4CQ9HCJ2 640 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 KIAA1024Q9UPX6 916 aa14.37□□□□□ -0.11
CHRNA7-223ENST00000637033 PALM3A6NDB9 673 aaPredicted RBP14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 BTDP43251 543 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 HDLBPQ00341 1268 aaKnown RBP14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 SLC9C1Q4G0N8 1177 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 HGSNATQ68CP4 663 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 TRMT1LQ7Z2T5 733 aaKnown RBP14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 ZSCAN29Q8IWY8 852 aaPredicted RBP14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 UHMK1Q8TAS1 419 aaKnown RBP14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 EFCC1Q9HA90 598 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 PRPF4BQ13523 1007 aaKnown RBP14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 KRT79Q5XKE5 535 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 KCTD1Q719H9 257 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 TEX11Q8IYF3 940 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 ZMYND12Q9H0C1 365 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 DPH5Q9H2P9 285 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 PLAAQ9Y263 795 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 SFI1A8K8P3 1242 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L15C9J2P7 530 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L13C9JLJ4 530 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L11C9JVI0 530 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L18D6R9N7 530 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L22D6RA61 530 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L17D6RBQ6 530 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L19D6RCP7 530 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L20D6RJB6 530 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 MPHOSPH10O00566 681 aaKnown RBP14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 SLC9A1P19634 815 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 GNA11P29992 359 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 HNRNPH1P31943 449 aaKnown RBP14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 FLT3P36888 993 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 GNAQP50148 359 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L24Q0WX57 530 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 USP17L6PQ6QN14 398 aa14.36□□□□□ -0.11
CHRNA7-223ENST00000637033 PCNTO95613 3336 aa14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 GOLGA8KD6RF30 607 aa14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 KIAA0754O94854 1291 aa14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 IFT20Q8IY31 132 aa14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 UBLCP1Q8WVY7 318 aaPredicted RBP14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 CELF4Q9BZC1 486 aaKnown RBP14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 PANK4Q9NVE7 773 aa14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 TIAM2Q8IVF5 1701 aa14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 PARP4Q9UKK3 1724 aaKnown RBP14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 POTEB3A0JP26 581 aa14.35□□□□□ -0.11
CHRNA7-223ENST00000637033 FAM196BA6NMK8 535 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms