RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 FAAP100Q0VG06 881 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ITGA7Q13683 1181 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 GNPTABQ3T906 1256 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PPTC7Q8NI37 304 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TRIM43Q96BQ3 446 aaPredicted RBP12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MTG1Q9BT17 334 aaPredicted RBP12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SLC26A6Q9BXS9 759 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ALDH8A1Q9H2A2 487 aaPredicted RBP12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PRKAG2Q9UGJ0 569 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TBX21Q9UL17 535 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PCDHA6Q9UN73 950 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PCDHA8Q9Y5H6 950 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 A0A1W2PPC1 479 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SMCO2A6NFE2 343 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 DCDC2CA8MYV0 355 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 KIAA0355O15063 1070 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 KPNA6O60684 536 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 GGPS1O95749 300 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CD4P01730 458 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TGFB3P10600 412 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ITGB8P26012 769 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 AK2P54819 239 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MDM2Q00987 491 aaPredicted RBP12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SP2Q02086 613 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 STK3Q13188 491 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 AP3B2Q13367 1082 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CELF3Q5SZQ8 465 aaKnown RBP12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 VTI1AQ96AJ9 217 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PGBD1Q96JS3 809 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SEZ6LQ9BYH1 1024 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ANO3Q9BYT9 981 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ZMYND12Q9H0C1 365 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 GLT8D2Q9H1C3 349 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 EHMT1Q9H9B1 1298 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SPATA31C2B4DYI2 1134 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 B4GALT4O60513 344 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 F2P00734 622 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SREBF1P36956 1147 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 AKAP17AQ02040 695 aaKnown RBP12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SCRN1Q12765 414 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 LAMC2Q13753 1193 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MYSM1Q5VVJ2 828 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CCDC148Q8NFR7 591 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CCDC12Q8WUD4 166 aaPredicted RBP12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 GPRASP2Q96D09 838 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 LBHD1Q9BQE6 289 aaPredicted RBP12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TMEM260Q9NX78 707 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 RTEL1Q9NZ71 1219 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 UBIAD1Q9Y5Z9 338 aa12.72□□□□□ -0.37
SRP54-AS1-205ENST00000636540 LAMA2P24043 3122 aaKnown RBP12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 STK36Q9NRP7 1315 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CPLX1O14810 134 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ADAMTS3O15072 1205 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TLR3O15455 904 aaKnown RBP12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SORBS3O60504 671 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PFKFB2O60825 505 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 LARGE1O95461 756 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 FOSP01100 380 aaPredicted RBP12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ZNF286BP0CG31 522 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ITGB5P18084 799 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 DGKDQ16760 1214 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 HSDL1Q3SXM5 330 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 NFRKBQ6P4R8 1299 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 METTL7BQ6UX53 244 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 REXO1Q8N1G1 1221 aaKnown RBP12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 KAT2BQ92831 832 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 BADQ92934 168 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SPATA33Q96N06 139 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TMEM39AQ9NV64 488 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 VPS54Q9P1Q0 977 aa12.71□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SCN5AQ14524 2016 aa12.71□□□□□ -0.38
SRP54-AS1-205ENST00000636540 TRIP12Q14669 1992 aaPredicted RBP12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 WDR81Q562E7 1941 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 DEXIO95424 95 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 KCNA2P16389 499 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 FXR1P51114 621 aaKnown RBP eCLIP12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 SSRP1Q08945 709 aaKnown RBP12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 MTMR1Q13613 665 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 NEDD9Q14511 834 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 NBPF20Q3BBV1 942 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 CPLX2Q6PUV4 134 aaKnown RBP12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 NLRX1Q86UT6 975 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 SESTD1Q86VW0 696 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 TDHQ8IZJ6 230 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 CRYGNQ8WXF5 182 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 CDHR1Q96JP9 859 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 SENP7Q9BQF6 1050 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 KATNAL1Q9BW62 490 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 UBE2OQ9C0C9 1292 aaKnown RBP12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 BCAS3Q9H6U6 928 aa12.7□□□□□ -0.38
SRP54-AS1-205ENST00000636540 C6orf50Q9HD87 102 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms