RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 CLUL1Q15846 466 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 RRP12Q5JTH9 1297 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 ZBTB37Q5TC79 503 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 POMZP3Q6PJE2 187 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 CHST15Q7LFX5 561 aaPredicted RBP9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 CATIPQ7Z7H3 387 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 MRPL41Q8IXM3 137 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 ZBTB34Q8NCN2 500 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 RCC1LQ96I51 464 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 NKX2-4Q9H2Z4 354 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 PRDM6Q9NQX0 595 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 INVSQ9Y283 1065 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 E9PCH4 1651 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 ERVK-7P63135 1459 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 TNRQ92752 1358 aa9.09□□□□□ -0.95
SMARCA2-250ENST00000636367 NTF4P34130 210 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 KPNA1P52294 538 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 HSPA2P54652 639 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 PCBP4P57723 403 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 ACAP2Q15057 778 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 DDB1Q16531 1140 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 PCSK7Q16549 785 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 MMS22LQ6ZRQ5 1243 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 C11orf74Q86VG3 221 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 C7orf61Q8IZ16 206 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 NKAPQ8N5F7 415 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 SLC5A5Q92911 643 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 TEKT5Q96M29 485 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 NUP88Q99567 741 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 EIF2AK1Q9BQI3 630 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 CRB3Q9BUF7 120 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 WDR18Q9BV38 432 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 APOL5Q9BWW9 433 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 JADE2Q9NQC1 790 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 PREX1Q8TCU6 1659 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 LINC01387J3KSC0 135 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 TIMM44O43615 452 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 VAMP4O75379 141 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 RNASEH2AO75792 299 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 CFBP00751 764 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 ITGA4P13612 1032 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 FXR1P51114 621 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 SCARF1Q14162 830 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 LHX8Q68G74 356 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 ZC3H7AQ8IWR0 971 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 FAM156AQ8NDB6 213 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 MPP4Q96JB8 637 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 ACO2Q99798 780 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 USP26Q9BXU7 913 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 DISC1Q9NRI5 854 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 MRFAP1Q9Y605 127 aa9.08□□□□□ -0.96
SMARCA2-250ENST00000636367 ARHGAP31Q2M1Z3 1444 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 UHRF1BP1Q6BDS2 1440 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 SOBPA7XYQ1 873 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 AQP7O14520 342 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 ZKSCAN1P17029 563 aaPredicted RBP9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 ZNF445P59923 1031 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 AUHQ13825 339 aaKnown RBP9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 BROXQ5VW32 411 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 SLC6A19Q695T7 634 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 MPHOSPH9Q99550 1183 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 ATXN7L1Q9ULK2 861 aaPredicted RBP9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 MYO3AQ8NEV4 1616 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 LMTK3Q96Q04 1460 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 UGGT1Q9NYU2 1555 aa9.07□□□□□ -0.96
SMARCA2-250ENST00000636367 CKMP06732 381 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 AFF1P51825 1210 aaKnown RBP9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 RASSF7Q02833 373 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 TMEM177Q53S58 311 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 PRAMEF13Q5VWM6 474 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 CCDC174Q6PII3 467 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 IGF2-ASQ6U949 168 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 HID1Q8IV36 788 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 CRACR2BQ8N4Y2 399 aaPredicted RBP9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 GTPBP3Q969Y2 492 aaKnown RBP9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 CABP5Q9NP86 173 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 B4GALT6Q9UBX8 382 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 SPATA31D1Q6ZQQ2 1576 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 PTPDC1A2A3K4 754 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 DLGAP3O95886 979 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 HOXC12P31275 282 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 IREB2P48200 963 aaKnown RBP9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 SESN3P58005 492 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 KRT72Q14CN4 511 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 DPY19L1Q2PZI1 675 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 NBPF12Q5TAG4 269 aaPredicted RBP9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 CREB3L3Q68CJ9 461 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 LDHAL6AQ6ZMR3 332 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 PPHLN1Q8NEY8 458 aaKnown RBP9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 PPP1R35Q8TAP8 253 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 CYB5D2Q8WUJ1 264 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 SGCZQ96LD1 299 aa9.06□□□□□ -0.96
SMARCA2-250ENST00000636367 ZFP42Q96MM3 310 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms